Pre_GI: BLASTP Hits

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Query: NC_008228:2295841:2310185 Pseudoalteromonas atlantica T6c, complete genome

Start: 2310185, End: 2311489, Length: 1305

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:2514544:2533291253329125344661176Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completecyanate transporter4e-75282
NC_016612:5231065:5256075525607552572651191Klebsiella oxytoca KCTC 1686 chromosome, complete genometransporter, major facilitator family protein6e-75281
NC_013850:3303500:3304908330490833060921185Klebsiella variicola At-22 chromosome, complete genomecyanate transporter2e-73276
NC_020209:47504:9037290372916191248Pseudomonas poae RE*1-1-14, complete genometransporter, major facilitator family protein3e-72272
NC_011883:487187:5074035074035085991197Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774,major facilitator superfamily MFS_15e-72271
NC_016048:2873669:2892227289222728935341308Oscillibacter valericigenes Sjm18-20, complete genomemajor facilitator superfamily transporter9e-67254
NC_011832:913994:9537649537649550381275Candidatus Methanosphaerula palustris E1-9c, complete genomemajor facilitator superfamily MFS_12e-65249
NC_013406:3650300:3656916365691636581541239Paenibacillus sp. Y412MC10 chromosome, complete genomecyanate transporter2e-61236
NC_017195:517344:5368515368515380081158Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeinner membrane transport protein YeaN1e-58227
NC_015172:1334958:1363883136388313650851203Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomemajor facilitator superfamily MFS_15e-56218
NC_007963:3574000:3587228358722835884511224Chromohalobacter salexigens DSM 3043, complete genomemajor facilitator superfamily MFS_12e-45183
NC_008148:1567703:1584766158476615859771212Rubrobacter xylanophilus DSM 9941, complete genomemajor facilitator superfamily MFS_17e-44178
NC_005773:1333863:1333863133386313350921230Pseudomonas syringae pv. phaseolicola 1448A, complete genomecyanate MFS transporter2e-40167
NC_015172:3095781:3100390310039031015921203Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomemajor facilitator superfamily MFS_14e-40166
NC_007963:3113739:3131163313116331323591197Chromohalobacter salexigens DSM 3043, complete genomemajor facilitator superfamily MFS_12e-33144
NC_019673:7797666:7806218780621878074711254Saccharothrix espanaensis DSM 44229 complete genomePermease, MFS-type2e-33143
NC_018524:2423016:2444624244462424458261203Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomemajor Facilitator Superfamily protein5e-32139
NC_001263:243000:2617332617332628811149Deinococcus radiodurans R1 chromosome 1, complete sequenceCynX-related transport protein, putative1e-31137
NC_016582:9664000:9678407967840796797141308Streptomyces bingchenggensis BCW-1 chromosome, complete genomeintegral membrane transporter9e-31135
NC_021175:2063611:2082401208240120835731173Streptococcus oligofermentans AS 1.3089, complete genometransporter1e-30134
NC_010545:11950:3396933969353361368Corynebacterium urealyticum DSM 7109, complete genomeputative permease of the major facilitator superfamily1e-28127
NC_015635:3860570:3889579388957938908561278Microlunatus phosphovorus NM-1, complete genomeputative major facilitator superfamily transporter2e-26120
NC_016803:2431672:2461391246139124626681278Desulfovibrio desulfuricans ND132 chromosome, complete genomemajor facilitator superfamily protein2e-24114
NC_013421:3117639:3133231313323131344001170Pectobacterium wasabiae WPP163, complete genomemajor facilitator superfamily MFS_13e-1893.2
NC_010501:4989455:4991856499185649930281173Pseudomonas putida W619, complete genomemajor facilitator superfamily MFS_17e-1892
NC_014550:2562053:2565132256513225664031272Arthrobacter arilaitensis Re117, complete genomeputative MFS superfamily transporter1e-1791.7
NC_012917:1840172:1842295184229518434641170Pectobacterium carotovorum subsp. carotovorum PC1, complete genomemajor facilitator superfamily MFS_11e-1791.3
NC_015424:2836920:2837940283794028392021263Aeromonas veronii B565 chromosome, complete genomeCyanate transport protein CynX5e-1375.9
NC_012880:2778795:2801016280101628021701155Dickeya dadantii Ech703, complete genomemajor facilitator superfamily MFS_17e-1375.5
NC_016745:1719800:1734105173410517352951191Oceanimonas sp. GK1 chromosome, complete genomemajor facilitator superfamily transporter3e-1273.6
NC_009667:1341000:1357461135746113586901230Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequencemajor facilitator transporter3e-1273.6
NC_009832:110239:1134831134831146821200Serratia proteamaculans 568, complete genomemajor facilitator superfamily MFS_14e-1273.2
NC_015566:69190:7280972809740081200Serratia sp. AS12 chromosome, complete genomemajor facilitator superfamily protein5e-1169.3
NC_015567:69190:7280972809740081200Serratia sp. AS9 chromosome, complete genomemajor facilitator superfamily protein5e-1169.3