Pre_GI: BLASTP Hits

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Query: NC_008228:1307943:1323322 Pseudoalteromonas atlantica T6c, complete genome

Start: 1323322, End: 1324146, Length: 825

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008228:1307943:131515213151521315976825Pseudoalteromonas atlantica T6c, complete genomeGumL1e-134478
NC_018678:1745944:175985517598551760700846Alteromonas macleodii str. 'English Channel 673' chromosome,hypothetical protein2e-73275
NC_017271:2906000:290682529068252907619795Xanthomonas campestris pv. raphani 756C chromosome, completeGumL protein9e-64243
NC_003902:2903493:290429229042922905086795Xanthomonas campestris pv. campestris str. ATCC 33913, completeGumL protein3e-63241
NC_007086:1988000:200613320061332006927795Xanthomonas campestris pv. campestris str. 8004, complete genomeGumL protein3e-63241
NC_011901:837085:850903850903851793891Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completehypothetical protein1e-24113
NC_010475:1582856:159295415929541593787834Synechococcus sp. PCC 7002, complete genomeputative pyruvyltransferase2e-0963.2