Pre_GI Gene

Some Help

Host: NC_008228 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_008228:1307943 Pseudoalteromonas atlantica T6c, complete genome

Host Lineage: Pseudoalteromonas atlantica; Pseudoalteromonas; Pseudoalteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: Isolated from a biofilm from San Diego Bay in California. Marine biofilm bacterium associated with shell disease in shellfish. A common marine bacterium that exists both in the water column, and in biofilms attached to surfaces. This organism produces a well characterized, commercially important agarase. Pseudoalteromonas atlantica has been isolated from lesions on crabs with shell disease. Shell disease is characterized by progressive degradation of the shell, often leading to an infection of the hemolymph (blood) and may be caused by Pseudoalteromonas, Alteromonas, Vibrio, or other marine organisms. In addition to producing extracellular enzymes which attack the shell, Pseudoalteromonas atlantica produces a the lipopolysaccharide which has been shown to be a potential virulence factor in shell disease.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
13079431308770828glycosyl transferase WecBTagACpsF familyQuickGO ontologyBLASTP
130878013098711092glycosyl transferase group 1QuickGO ontologyBLASTP
130987513110021128glycosyl transferase group 1QuickGO ontologyBLASTP
131101713123061290exopolysaccharide production proteinQuickGO ontologyBLASTP
13123031313250948glycosyl transferase family 2QuickGO ontologyBLASTP
13134151314410996acyltransferase 3QuickGO ontologyBLASTP
13151521315976825GumLQuickGO ontologyBLASTP
131602413171691146acyltransferase 3QuickGO ontologyBLASTP
131743013192741845acyltransferase 3QuickGO ontologyBLASTP
13193741320021648hypothetical proteinBLASTP
13207731321690918hypothetical protein
13219701322884915hypothetical protein
13233221324146825xanthan biosynthesis pyruvyltransferase GumLQuickGO ontologyBLASTP
132457813260561479hypothetical proteinBLASTP
132640413288062403hypothetical proteinBLASTP
13290111329430420hypothetical protein
132951213308791368oxygen-independent coproporphyrinogen III oxidaseQuickGO ontologyBLASTP