Pre_GI: BLASTP Hits

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Query: NC_008150:4634695:4638459 Yersinia pestis Antiqua, complete genome

Start: 4638459, End: 4638821, Length: 363

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from the Republic of Congo. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017160:4508000:451645445164544516816363Yersinia pestis D182038 chromosome, complete genomeputative regulator7e-66248
NC_008309:555680:571469571469571864396Haemophilus somnus 129PT, complete genomepossible transcriptional regulator9e-29125
NC_011770:860944:880514880514880840327Pseudomonas aeruginosa LESB58, complete genomeDNA-binding protein7e-1682.4
NC_020209:3262000:326693532669353267261327Pseudomonas poae RE*1-1-14, complete genomeDNA-binding protein2e-1373.9
NC_011769:2016000:201655420165542016892339Desulfovibrio vulgaris str. 'Miyazaki F', complete genometranscriptional regulator, XRE family3e-1167.4
NC_014365:2843126:284585328458532846197345Desulfarculus baarsii DSM 2075 chromosome, complete genometranscriptional regulator, XRE family2e-1064.3
NC_019940:2432689:243778424377842438128345Thioflavicoccus mobilis 8321 chromosome, complete genometranscriptional regulator1e-0961.6
NC_013960:979556:996470996470996802333Nitrosococcus halophilus Nc4 chromosome, complete genomehelix-turn-helix domain protein7e-0855.8
NC_016629:2784000:280659328065932806958366Desulfovibrio africanus str. Walvis Bay chromosome, completehelix-turn-helix domain-containing protein9e-0752.4