Pre_GI: BLASTP Hits

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Query: NC_008149:2652825:2670230 Yersinia pestis Nepal516, complete genome

Start: 2670230, End: 2671081, Length: 852

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a soil sample from Nepal. Causative agent of plague. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010159:1710268:172757617275761728427852Yersinia pestis Angola, complete genomeRIO1 family protein kinase1e-149528
NC_003143:1973867:197896119789611979812852Yersinia pestis CO92, complete genomehypothetical protein1e-149528
NC_008800:1942000:194380419438041944652849Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein1e-138492
NC_009436:3367194:338666233866623387516855Enterobacter sp. 638, complete genomehypothetical protein1e-110399
NC_009439:918534:923928923928924815888Pseudomonas mendocina ymp, complete genomeprotein of unknown function RIO11e-103375
NC_014800:329861:349619349619350473855Pseudoalteromonas sp. SM9913 chromosome chromosome II, completeputative kinase2e-99362
NC_014733:2851984:685268527727876Methylovorus sp. MP688 chromosome, complete genomehypothetical protein9e-90330
NC_014924:2840310:285335428533542854211858Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeRIO-like kinase8e-84310
NC_013922:2110894:213161521316152132490876Natrialba magadii ATCC 43099 chromosome, complete genomeRIO-like kinase2e-1893.2
NC_015562:1816000:181872518187251819543819Methanotorris igneus Kol 5 chromosome, complete genomeNon-specific serine/threonine protein kinase2e-1686.3
NC_003551:478065:478065478065478856792Methanopyrus kandleri AV19, complete genomePredicted serine/threonine protein kinase6e-1375.1
NC_017954:345430:365157365157365939783Thermogladius cellulolyticus 1633 chromosome, complete genomeNon-specific serine/threonine protein kinase2e-1169.7
NC_014804:401313:415700415700416470771Thermococcus barophilus MP chromosome, complete genomehypothetical protein3e-1169.3
NC_009376:1633283:165530716553071656113807Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomehypothetical protein1e-1067.4
NC_016885:237682:243276243276244082807Pyrobaculum oguniense TE7 chromosome, complete genomeSerine/threonine protein kinase involved in cell cycle control1e-1067.4
NC_019942:1078837:110817911081791108943765Aciduliprofundum sp. MAR08-339, complete genomeserine/threonine protein kinase involved in cell cycle control4e-1065.5
NC_005213:202400:408446408446409198753Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-0964.3
NC_005213:384998:408446408446409198753Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein1e-0964.3
NC_005213:384998:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His2e-0963.2
NC_005213:295994:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His2e-0963.2
NC_005213:202400:221768221768409281187514Nanoarchaeum equitans Kin4-M, complete genometRNA-His2e-0963.2
NC_014961:1071424:107284110728411073656816Desulfurococcus mucosus DSM 2162 chromosome, complete genomeNon-specific serine/threonine protein kinase3e-0962.8
NC_013156:471978:482281482281483111831Methanocaldococcus fervens AG86, complete genomeNon-specific serine/threonine protein kinase8e-0857.8
NC_002689:1228061:123202912320291232784756Thermoplasma volcanium GSS1, complete genomePredicted serine/threonine protein kinase1e-0757.4
NC_019792:2416000:241884724188472419755909Natronobacterium gregoryi SP2 chromosome, complete genomefused RIO-like serine/threonine protein kinase/HTH domain-containing protein2e-0756.6
NC_015320:409949:433685433685434563879Archaeoglobus veneficus SNP6 chromosome, complete genomeNon-specific serine/threonine protein kinase3e-0755.8
NC_015416:1103900:111959611195961120465870Methanosaeta concilii GP-6 chromosome, complete genomeserine/threonine protein kinase RIO2 (RIO kinase 2)7e-0754.7
NC_014374:1072218:115442011544201155367948Acidilobus saccharovorans 345-15 chromosome, complete genomePutative kinase2e-0653.1