Pre_GI: BLASTP Hits

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Query: NC_008148:258292:269314 Rubrobacter xylanophilus DSM 9941, complete genome

Start: 269314, End: 271203, Length: 1890

Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria

General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014221:1541517:1550925155092515528651941Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Crm2 family0758
NC_013440:1727134:1743413174341317453651953Haliangium ochraceum DSM 14365, complete genomeCRISPR-associated protein, Crm2 family2e-100367
NC_011901:1860887:1909040190904019109531914Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeCRISPR-associated protein, Crm2 family3e-98359
NC_013526:65495:7202472024738981875Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein, Crm2 family4e-62239
NC_014410:937599:9555689555689577482181Thermoanaerobacterium thermosaccharolyticum DSM 571 chromosome,CRISPR-associated protein, Crm2 family2e-36154
NC_015577:3364985:3378533337853333810042472Treponema azotonutricium ZAS-9 chromosome, complete genomehydrolase of the HD superfamily6e-36152
NC_011899:1603500:1617298161729816193282031Halothermothrix orenii H 168, complete genomeCRISPR-associated protein, Crm2 family5e-34146
NC_009972:791702:8041338041338059831851Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomeCRISPR-associated RAMP Crm2 family protein2e-32141
NC_007759:585264:5927165927165954242709Syntrophus aciditrophicus SB, complete genomehydrolase of the HD superfamily2e-30134
NC_000918:246792:2610902610902629551866Aquifex aeolicus VF5, complete genomehypothetical protein1e-26121
NC_013894:1:5498549873571860Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated protein, Crm2 family1e-26121
NC_011961:85083:1108851108851126991815Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecrispr-associated protein, Crm2 family3e-25117
NC_017095:1573170:1585490158549015879822493Fervidobacterium pennivorans DSM 9078 chromosome, complete genomeCRISPR-associated protein, Cmr2 family4e-24113
NC_015172:1255956:1273060127306012747721713Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomeCRISPR-associated protein, Crm2 family6e-24112
NC_008095:8890464:8892622889262288944121791Myxococcus xanthus DK 1622, complete genomeCRISPR-associated protein Crm22e-23110
NC_014209:787535:7875357875357902552721Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein, Crm2 family6e-21102
NC_013921:755800:7558007558007585202721Thermoanaerobacter italicus Ab9 chromosome, complete genomeCRISPR-associated protein, Crm2 family9e-21102
NC_011420:3582500:3596933359693335986751743Rhodospirillum centenum SW, complete genomeCRISPR-associated protein, TM1794 family1e-20102
NC_020126:10091703:1011079810110798101126391842Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated Cmr2 family protein5e-20100
NC_015680:691457:6998306998307027122883Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated protein, Crm2 family9e-1995.9
NC_015387:1898496:1914656191465619164251770Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Crm2 family9e-1892.4
NC_000917:1666836:1677510167751016805243015Archaeoglobus fulgidus DSM 4304, complete genomehypothetical protein3e-1687.4
NC_014221:1786122:1795984179598417974111428Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Crm2 family1e-1379
NC_014915:332784:3561323561323577721641Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein, Crm2 family3e-1377.4
NC_011653:310000:3154363154363179192484Thermosipho africanus TCF52B, complete genomecrispr-associated protein, Crm2 family, putative2e-0964.7