Pre_GI: BLASTP Hits

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Query: NC_008146:861319:883980 Mycobacterium sp. MCS, complete genome

Start: 883980, End: 886244, Length: 2265

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:868623:8927098927098949732265Mycobacterium sp. KMS, complete genomeprotein of unknown function DUF26201420
NC_009943:272158:2771192771192790921974Candidatus Desulfococcus oleovorans Hxd3, complete genomeprotein of unknown function DUF2627e-152538
NC_015955:1:1295312953150582106Halophilic archaeon DL31 plasmid phalar01, complete sequencehypothetical protein1e-62242
NC_007908:1108494:1129538112953811312651728Rhodoferax ferrireducens T118, complete genomeprotein of unknown function DUF2621e-61238
NC_008782:3800500:3800846380084638025581713Acidovorax sp. JS42, complete genomeprotein of unknown function DUF2626e-55216
NC_011958:976500:978988978988979935948Rhodobacter sphaeroides KD131 chromosome 2, complete genomehypothetical protein3e-46187
NC_011295:1263500:1286951128695112887021752Coprothermobacter proteolyticus DSM 5265, complete genomehypothetical protein3e-32140
NC_013165:329185:3457973457973476081812Slackia heliotrinireducens DSM 20476, complete genomehypothetical protein2e-30135
NC_014831:2258398:2266920226692022687161797Thermaerobacter marianensis DSM 12885 chromosome, complete genomeProtein of unknown function DUF20812e-30134
NC_016612:3361802:3370027337002733716101584Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein4e-30133
NC_015737:1976000:2009520200952020112981779Clostridium sp. SY8519, complete genomehypothetical protein2e-27124
NC_011026:1181940:1202012120201212038201809Chloroherpeton thalassium ATCC 35110, complete genomeprotein of unknown function DUF2623e-27124
NC_019902:2943719:2956287295628729579661680Thioalkalivibrio nitratireducens DSM 14787, complete genomeprotein of unknown function DUF2623e-27124
NC_015565:287900:3162553162553179161662Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein6e-27123
NC_009615:2503465:2535782253578225375961815Parabacteroides distasonis ATCC 8503 chromosome, complete genomehypothetical protein9e-27122
NC_010424:825117:8335938335938351611569Candidatus Desulforudis audaxviator MP104C, complete genomeprotein of unknown function DUF2627e-25116
NC_009953:3426344:3440520344052034427902271Salinispora arenicola CNS-205 chromosome, complete genomehypothetical protein6e-25116
NC_012660:4669500:4684346468434646859291584Pseudomonas fluorescens SBW25 chromosome, complete genomehypothetical protein4e-24113
NC_013510:2288746:2296096229609622978741779Thermomonospora curvata DSM 43183, complete genomeprotein of unknown function DUF2629e-22105
NC_013522:1538994:1547709154770915494391731Thermanaerovibrio acidaminovorans DSM 6589, complete genomeprotein of unknown function DUF2621e-21105
NC_009484:857384:8752448752448769111668Acidiphilium cryptum JF-5 chromosome, complete genomehypothetical protein1e-21105
NC_014366:2826575:2829646282964628315201875Gamma proteobacterium HdN1, complete genomehypothetical protein2e-1998.2
NC_015711:8964410:2452245242901839Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein5e-1997.1
NC_007964:328825:344586344586344912327Nitrobacter hamburgensis X14, complete genomeuncharacterized conserved protein-like8e-1996.3
NC_015660:1918307:1930496193049619325232028Geobacillus thermoglucosidasius C56-YS93 chromosome, completehypothetical protein7e-1893.2
NC_015958:2206032:2206032220603222077651734Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomehypothetical protein7e-1893.2
NC_017098:1542284:1563088156308815648871800Spirochaeta africana DSM 8902 chromosome, complete genomehypothetical protein4e-1790.5
NC_014650:1893758:1903956190395619059832028Geobacillus sp. Y4.1MC1 chromosome, complete genomehypothetical protein5e-1790.1
NC_010337:2848360:2871285287128528730271743Heliobacterium modesticaldum Ice1, complete genomehypothetical protein8e-1789.7
NC_016906:181254:2275212275212293441824Gordonia polyisoprenivorans VH2 chromosome, complete genomehypothetical protein1e-1689
NC_008268:1748635:1770432177043217723961965Rhodococcus sp. RHA1, complete genomehypothetical protein1e-1689
NC_012918:928903:948690948690949016327Geobacter sp. M21 chromosome, complete genomehypothetical protein2e-1688.2
NC_016584:954000:9766799766799783971719Desulfosporosinus orientis DSM 765 chromosome, complete genomehypothetical protein4e-1687.4
NC_013093:7222000:7222001722200172237821782Actinosynnema mirum DSM 43827, complete genomeprotein of unknown function DUF2625e-1687
NC_010322:5349000:5366732536673253685581827Pseudomonas putida GB-1 chromosome, complete genomehypothetical protein7e-1686.7
NC_014220:70490:9275792757945501794Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomeProtein of unknown function DUF20811e-1585.9
NC_008570:1143578:1178163117816311800911929Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-1482.4
NC_000909:597692:6136646136646154061743Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein3e-1480.9
NC_020829:1:1442614426162161791Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-1378.6
NC_006177:2369361:237823323782332378643411Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-1378.2
NC_019902:2372097:2382333238233323841081776Thioalkalivibrio nitratireducens DSM 14787, complete genomehypothetical protein3e-1274.7
NC_006510:3321426:3324415332441533261811767Geobacillus kaustophilus HTA426, complete genomehypothetical protein2e-1171.6
NC_015381:4363005:437180643718064372483678Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein3e-1170.9
NC_015437:767572:7756487756487774141767Selenomonas sputigena ATCC 35185 chromosome, complete genomeProtein of unknown function DUF20814e-1170.9
NC_009049:1934398:1942589194258919445141926Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequenceprotein of unknown function DUF2626e-1170.1
NC_012590:637651:6573276573276591891863Corynebacterium aurimucosum ATCC 700975, complete genomehypothetical protein7e-1169.7
NC_012793:3243727:3259602325960232613681767Geobacillus sp. WCH70, complete genomeprotein of unknown function DUF2621e-1068.9
NC_009434:3611738:3721252372125237229251674Pseudomonas stutzeri A1501, complete genomehypothetical protein2e-1068.2
NC_015856:1:1186311863136861824Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein2e-1068.2
NC_008686:1472899:1497762149776214996841923Paracoccus denitrificans PD1222 chromosome 1, complete sequenceprotein of unknown function DUF2624e-1067.4
NC_015510:644500:6530656530656548761812Haliscomenobacter hydrossis DSM 1100 chromosome, complete genomehypothetical protein6e-1066.6
NC_015497:2859724:2866855286685528684981644Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomehypothetical protein9e-1066.2
NC_020453:1084238:1133665113366511359232259Agromonas oligotrophica S58 DNA, complete genomehypothetical protein2e-0965.1
NC_019904:334654:3412423412423430681827Echinicola vietnamensis DSM 17526 chromosome, complete genomehypothetical protein8e-0963.2
NC_014814:859124:8817248817248835651842Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein8e-0963.2
NC_009720:2489003:2508645250864525105521908Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-0758.9
NC_008786:2809985:2815237281523728174922256Verminephrobacter eiseniae EF01-2, complete genomehypothetical protein3e-0758.2
NC_003888:7337453:7370866737086673726831818Streptomyces coelicolor A3(2), complete genomehypothetical protein9e-0756.2
NC_015381:4363005:4373886437388643750221137Burkholderia gladioli BSR3 chromosome 1, complete sequence4e-0654.3