Pre_GI: BLASTP Hits

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Query: NC_008146:5106775:5128066 Mycobacterium sp. MCS, complete genome

Start: 5128066, End: 5130108, Length: 2043

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:5144433:5167149516714951691912043Mycobacterium sp. KMS, complete genomeconserved hypothetical protein01323
NC_014550:2562053:2562053256205325640922040Arthrobacter arilaitensis Re117, complete genomehypothetical protein01053
NC_013131:4356247:4367897436789743699392043Catenulispora acidiphila DSM 44928, complete genomehypothetical protein0960
NC_015381:4363005:4382354438235443844052052Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein0647
NC_018866:63498:8072880728827672040Dehalobacter sp. DCA chromosome, complete genomehypothetical protein6e-119428
NC_018867:121512:1463551463551483942040Dehalobacter sp. CF chromosome, complete genomehypothetical protein6e-119428
NC_013732:136673:1447541447541468052052Spirosoma linguale DSM 74 plasmid pSLIN02, complete sequencehypothetical protein6e-94345
NC_003552:3222552:3232687323268732347232037Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-75284
NC_016026:1224129:1239220123922012412382019Micavibrio aeruginosavorus ARL-13 chromosome, complete genomehypothetical protein3e-66253
NC_002950:1511955:1521796152179615238142019Porphyromonas gingivalis W83, complete genomeATPase, putative9e-65248
NC_007404:974461:9935999935999955391941Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein6e-64246
NC_014006:994500:1003125100312510050951971Sphingobium japonicum UT26S chromosome 1, complete genomeputative GTPase/ATPase5e-62239
NC_012560:5338707:5351561535156153535581998Azotobacter vinelandii DJ, complete genomehypothetical protein1e-58228
NC_021150:5298500:5309453530945353114501998Azotobacter vinelandii CA6, complete genomehypothetical protein1e-58228
NC_014371:1076642:1090374109037410924372064Prevotella melaninogenica ATCC 25845 chromosome chromosome II,hypothetical protein2e-54214
NC_019907:539749:5419025419025438211920Liberibacter crescens BT-1 chromosome, complete genomeylh1e-34148
NC_010161:2235500:2236907223690722388261920Bartonella tribocorum CIP 105476, complete genomehypothetical protein2e-1068.6
NC_009050:212270:2264162264162285422127Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequencehypothetical protein2e-0861.2