Pre_GI: BLASTP Hits

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Query: NC_008146:1577604:1598489 Mycobacterium sp. MCS, complete genome

Start: 1598489, End: 1599430, Length: 942

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1557711:160414616041461604829684Mycobacterium sp. KMS, complete genomeDSBA oxidoreductase1e-112406
NC_008726:3915979:392119339211933921852660Mycobacterium vanbaalenii PYR-1, complete genomeDSBA oxidoreductase2e-69262
NC_009338:2925286:295980629598062960465660Mycobacterium gilvum PYR-GCK chromosome, complete genomeDSBA oxidoreductase2e-66252
NC_013441:2788806:280706128070612807705645Gordonia bronchialis DSM 43247, complete genomeDSBA oxidoreductase4e-54211
NC_013441:2842134:285189828518982852542645Gordonia bronchialis DSM 43247, complete genomeDSBA oxidoreductase3e-53209
NC_009342:135500:155671155671156354684Corynebacterium glutamicum R chromosome, complete genomehypothetical protein6e-51201
NC_009953:188000:202284202284202946663Salinispora arenicola CNS-205 chromosome, complete genomeDSBA oxidoreductase1e-39164
NC_008740:3602367:361861136186113619249639Marinobacter aquaeolei VT8, complete genomeDSBA oxidoreductase2e-1790.5
NC_017506:93494:966749667497312639Marinobacter adhaerens HP15 chromosome, complete genomeDSBA oxidoreductase1e-1687.8
NC_008344:49039:799077990780566660Nitrosomonas eutropha C91, complete genomeDSBA oxidoreductase2e-1687
NC_014010:1020488:105893410589341059722789Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeDSBA oxidoreductase6e-1581.6
NC_016609:2730449:273831027383102738840531Niastella koreensis GR20-10 chromosome, complete genomeDSBA oxidoreductase7e-1581.6
NC_014960:3410741:3431239343123934324411203Anaerolinea thermophila UNI-1, complete genomepeptidyl-prolyl cis-trans isomerase B9e-1477.8
NC_009092:1874888:188535218853521886140789Shewanella loihica PV-4, complete genomeDSBA oxidoreductase5e-1375.5
NC_009434:695582:762105762105762710606Pseudomonas stutzeri A1501, complete genomeouter membrane protein9e-1374.7
NC_015656:2565417:2583823258382325857061884Frankia symbiont of Datisca glomerata chromosome, complete genomeNa(+)/H(+) antiporter nhaA3e-1273.2
NC_013849:466091:498097498097499047951Ferroglobus placidus DSM 10642 chromosome, complete genomeDSBA oxidoreductase4e-1272.4
NC_007412:147757:171716171716172306591Anabaena variabilis ATCC 29413 plasmid C, complete sequenceDSBA oxidoreductase4e-1272.4
NC_017506:93494:928209282093497678Marinobacter adhaerens HP15 chromosome, complete genomeDSBA oxidoreductase8e-1271.2
NC_010628:3675128:368693336869333687475543Nostoc punctiforme PCC 73102, complete genomeDSBA oxidoreductase5e-1168.6
NC_015057:135585:1489501489501506611712Acidobacterium sp. MP5ACTX9 plasmid pACIX901, complete sequence9e-1167.8
NC_009512:2238437:224929122492912249830540Pseudomonas putida F1, complete genomeDSBA oxidoreductase6e-1065.1
NC_016614:822715:831168831168831941774Vibrio sp. EJY3 chromosome 2, complete sequencehypothetical protein2e-0963.5
NC_010617:263985:2816362816362834891854Kocuria rhizophila DC2201, complete genomeNa(+)/H(+) antiporter7e-0961.6
NC_014623:8463363:8466539846653984685422004Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDSBA-like thioredoxin domain-containing protein9e-0961.2
NC_009380:1885024:1901057190105719030151959Salinispora tropica CNB-440 chromosome, complete genomeNa+/H+ antiporter NhaA2e-0860.1
NC_014623:464324:470970470970471626657Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeDSBA oxidoreductase family protein6e-0858.5
NC_013132:705314:707697707697708236540Chitinophaga pinensis DSM 2588, complete genomehypothetical protein2e-0756.6
NC_019771:1356000:136414613641461364697552Anabaena cylindrica PCC 7122, complete genomeDSBA oxidoreductase9e-0754.7
NC_015957:3067919:309366630936663094181516Streptomyces violaceusniger Tu 4113 chromosome, complete genomeDSBA oxidoreductase1e-0654.3