Pre_GI: BLASTP Hits

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Query: NC_008146:1016446:1016892 Mycobacterium sp. MCS, complete genome

Start: 1016892, End: 1017401, Length: 510

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008705:1022252:102269810226981023207510Mycobacterium sp. KMS, complete genomeconserved hypothetical protein1e-95348
NC_009077:1027357:103131210313121031821510Mycobacterium sp. JLS, complete genomehypothetical protein2e-93340
NC_008705:1022252:102178610217861022265480Mycobacterium sp. KMS, complete genomeconserved hypothetical protein3e-33140
NC_008146:1016446:101598010159801016459480Mycobacterium sp. MCS, complete genomehypothetical protein3e-33140
NC_009077:1027357:103040210304021030881480Mycobacterium sp. JLS, complete genomehypothetical protein7e-33139
NC_008268:7485710:750796975079697508517549Rhodococcus sp. RHA1, complete genomehypothetical protein4e-21100
NC_002944:4446083:445354144535414454065525Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein2e-2098.6
NC_010572:3363830:338583933858393386291453Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-2097.8
NC_013929:4186840:420456442045644205016453Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-1994.4
NC_003888:5042283:506185950618595062311453Streptomyces coelicolor A3(2), complete genomehypothetical protein3e-1994.4
NC_016114:3008500:300902330090233009475453Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeacyl dehydratase MaoC4e-1994
NC_015957:639774:659685659685660155471Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein8e-1992.8
NC_020133:77341:9364493644946481005Mycobacterium liflandii 128FXT, complete genomeMaoC-like dehydratase5e-1890.5
NC_010612:103081:1326041326041336351032Mycobacterium marinum M, complete genomehypothetical protein5e-1890.1
NC_016109:3591401:361608936160893616547459Kitasatospora setae KM-6054, complete genomeputative fatty acid synthase1e-1789.4
NC_013174:601434:610171610171610653483Jonesia denitrificans DSM 20603, complete genomehypothetical protein2e-1375.1
NC_009664:1569335:161422916142291614690462Kineococcus radiotolerans SRS30216, complete genomehypothetical protein1e-0962.8
NC_018681:5490963:549983554998355500695861Nocardia brasiliensis ATCC 700358 chromosome, complete genomehypothetical protein2e-0755.5
NC_008268:3162824:317784131778413178296456Rhodococcus sp. RHA1, complete genomehypothetical protein3e-0754.7
NC_009511:1781914:179017017901701790616447Sphingomonas wittichii RW1 chromosome, complete genomehypothetical protein5e-0753.9