Pre_GI: BLASTP Hits

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Query: NC_008044:136844:156335 Silicibacter sp. TM1040, complete genome

Start: 156335, End: 156646, Length: 312

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003911:480202:485983485983486294312Silicibacter pomeroyi DSS-3, complete genomeNADH-ubiquinone oxidoreductase family protein4e-46182
NC_005296:2860000:287674128767412877046306Rhodopseudomonas palustris CGA009, complete genomepossible NADH dehydrogenase (ubiquinone) Fe-S protein 4 (18kD) (NADH-coenzyme Q reductase)3e-26116
NC_008347:1636660:164204216420421642347306Maricaulis maris MCS10, complete genomeETC complex I subunit conserved region4e-26116
NC_014834:3130715:313251431325143132819306Rhodopseudomonas palustris DX-1 chromosome, complete genomeETC complex I subunit protein5e-26116
NC_009484:775828:779788779788780099312Acidiphilium cryptum JF-5 chromosome, complete genomeETC complex I subunit region2e-24110
NC_003317:1263562:128079212807921281097306Brucella melitensis 16M chromosome I, complete sequenceNADH-UBIQUINONE OXIDOREDUCTASE 18 KD SUBUNIT1e-22105
NC_013119:707804:707804707804708109306Brucella microti CCM 4915 chromosome 1, complete sequenceoxidoreductase, putative1e-22105
NC_016795:1673464:169070916907091691014306Brucella abortus A13334 chromosome 1, complete sequenceNADH-ubiquinone oxidoreductase 18 kDa subunit1e-22105
NC_008380:2210649:221692422169242217229306Rhizobium leguminosarum bv. viciae 3841, complete genomeputative NADH-ubiquinone oxidoreductase subunit3e-22103
NC_014010:484000:487195487195487512318Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeNADH-ubiquinone oxidoreductase 18 kDa subunit-like protein2e-21101
NC_016778:329288:349035349035349304270Brucella canis HSK A52141 chromosome 1, complete sequenceNADH-ubiquinone oxidoreductase 18 kDa subunit3e-1787
NC_017248:721764:721764721764722033270Brucella melitensis NI chromosome chromosome I, complete sequenceETC complex I subunit3e-1787
NC_012988:1459961:149616714961671496925759Methylobacterium extorquens DM4, complete genomehypothetical protein1e-1581.6
NC_007799:186000:202899202899203213315Ehrlichia chaffeensis str. Arkansas, complete genomeputative oxidoreductase1e-1581.6
NC_012026:75812:758127581276132321Anaplasma marginale str. Florida, complete genomehypothetical protein2e-1581.3
NC_004842:62000:764117641176731321Anaplasma marginale str. St. Maries, complete genomehypothetical protein2e-1581.3
NC_007798:301456:313714313714314004291Neorickettsia sennetsu str. Miyayama, complete genomeputative oxidoreductase4e-1373.2
NC_015259:673662:696726696726697301576Polymorphum gilvum SL003B-26A1 chromosome, complete genomeETC complex I subunit conserved region6e-1062.8
NC_012988:1459961:150336715033671504119753Methylobacterium extorquens DM4, complete genomehypothetical protein6e-0752.8
NC_010725:3917369:392679939267993927551753Methylobacterium populi BJ001, complete genomeETC complex I subunit conserved region4e-0650.1