Pre_GI: BLASTP Hits

Some Help

Query: NC_008044:136844:150726 Silicibacter sp. TM1040, complete genome

Start: 150726, End: 151112, Length: 387

Host Lineage: Ruegeria; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: This strain was isolated from a culture of the dinoflagellate Pfiesteria piscicida CCMP1830 which has been implicated in many large scale algal blooms resulting in increased mortality in fish. The bacteria are attached to the surface of the dinoflagellate and in some ways allow the dinoflagellate to grow as those lacking the bacteria die off. The bacterium also chemotaxes towards the dinoflagellate product DMSP (dimethylsulfoniopropionate) and metabolizes it. DMSP is a major source of sulfur in marine ecosystems and plays a role in the sulfur biogeochemical cycle. The implication is a tight association between these important dinoflagellates and this marine bacterium.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008043:499399:511757511757512116360Silicibacter sp. TM1040 mega plasmid, complete sequenceresponse regulator receiver protein9e-47185
NC_008044:857759:870157870157870582426Silicibacter sp. TM1040, complete genomeresponse regulator receiver protein1e-1891.7
NC_015638:3113253:311681731168173117257441Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeresponse regulator receiver3e-1270.5
NC_013730:2403930:240692224069222407329408Spirosoma linguale DSM 74, complete genomeresponse regulator receiver protein6e-1062.8
NC_013730:906389:918802918802919242441Spirosoma linguale DSM 74, complete genomeresponse regulator receiver protein7e-1062.8
NC_013730:3137391:314426231442623144870609Spirosoma linguale DSM 74, complete genomeresponse regulator receiver protein1e-0962
NC_015177:2972701:298715929871592987551393Pedobacter saltans DSM 12145 chromosome, complete genomeresponse regulator receiver1e-0961.6
NC_013222:817686:854156854156854554399Robiginitalea biformata HTCC2501, complete genomeresponse regulator4e-0856.6
NC_007645:4356865:437293843729384373390453Hahella chejuensis KCTC 2396, complete genomeFOG: CheY-like receiver7e-0856.2
NC_016112:57641:627546275463158405Methylomicrobium alcaliphilum chromosome, complete genomeresponse regulator receiver protein7e-0855.8
NC_016622:527688:5342885342885354751188Azospirillum lipoferum 4B, complete genomeputative two-component response regulator8e-0855.8
NC_016935:7426389:7434146743414674359631818Paenibacillus mucilaginosus 3016 chromosome, complete genomeLuxR family two component transcriptional regulator2e-0754.3
NC_010505:5525461:554401855440185544443426Methylobacterium radiotolerans JCM 2831, complete genomeresponse regulator receiver protein2e-0754.3
NC_001264:28266:534665346653915450Deinococcus radiodurans R1 chromosome 2, complete sequenceresponse regulator3e-0753.9
NC_014972:2659388:2685767268576726892103444Desulfobulbus propionicus DSM 2032 chromosome, complete genomeCheA signal transduction histidine kinase8e-0752.4
NC_009428:1827352:184069518406951841063369Rhodobacter sphaeroides ATCC 17025 chromosome, complete genomeresponse regulator receiver protein9e-0752.4
NC_013887:213699:232192232192232557366Methanocaldococcus sp. FS406-22 chromosome, complete genomeresponse regulator receiver protein9e-0752.4
NC_013037:2851940:287766328776632878136474Dyadobacter fermentans DSM 18053, complete genomeresponse regulator receiver protein1e-0652
NC_016940:470163:502234502234502953720Saprospira grandis str. Lewin chromosome, complete genometwo component transcriptional regulator, LytTR family protein2e-0651.6
NC_016609:7565483:756548375654837566118636Niastella koreensis GR20-10 chromosome, complete genometwo component transcriptional regulator, LuxR family1e-0651.6
NC_002488:1812696:1855863185586318611305268Xylella fastidiosa 9a5c, complete genomechemotaxis-related protein kinase2e-0650.8
NC_014315:114151:1179431179431232315289Nitrosococcus watsoni C-113 chromosome, complete genomeCheA signal transduction histidine kinase3e-0650.4
NC_014934:4164603:416750241675024167903402Cellulophaga algicola DSM 14237 chromosome, complete genomeresponse regulator receiver protein3e-0650.4
NC_013939:148706:1629161629161641421227Deferribacter desulfuricans SSM1, complete genomehypothetical protein4e-0650.1
NC_015320:160792:170824170824171219396Archaeoglobus veneficus SNP6 chromosome, complete genomeresponse regulator receiver protein6e-0649.7