Pre_GI: BLASTP Hits

Some Help

Query: NC_007953:1043957:1046904 Burkholderia xenovorans LB400 chromosome 3, complete sequence

Start: 1046904, End: 1047965, Length: 1062

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007794:1504449:1527910152791015289801071Novosphingobium aromaticivorans DSM 12444, complete genomeRieske (2Fe-2S) protein7e-51201
NC_015976:2064387:2080870208087020819611092Sphingobium sp. SYK-6, complete genomeputative iron-sulfur protein1e-50201
NC_015976:2023540:2023540202354020246611122Sphingobium sp. SYK-6, complete genomeputative iron-sulfur protein1e-50201
NC_015976:2023540:2040746204074620418251080Sphingobium sp. SYK-6, complete genomeputative iron-sulfur protein5e-49195
NC_020302:146807:1595281595281606491122Corynebacterium halotolerans YIM 70093 = DSM 44683, completevanillate O-demethylase oxygenase3e-48192
NC_016906:1565868:1578852157885215799791128Gordonia polyisoprenivorans VH2 chromosome, complete genomeputative vanillate O-demethylase oxygenase subunit A5e-47188
NC_013446:2062862:2080671208067120817351065Comamonas testosteroni CNB-2, complete genomeRieske iron-sulfur protein4e-46185
NC_008786:1507139:1530474153047415315321059Verminephrobacter eiseniae EF01-2, complete genomeVanillate monooxygenase2e-42172
NC_012792:385670:4078944078944089521059Variovorax paradoxus S110 chromosome 2, complete genomeRieske (2Fe-2S) domain protein2e-41169
NC_010501:3448389:3454768345476834558441077Pseudomonas putida W619, complete genomeVanillate monooxygenase9e-41167
NC_014118:1592000:1614635161463516156931059Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRieske (2Fe-2S) iron-sulfur domain protein6e-40164
NC_007974:2097334:2145616214561621466591044Ralstonia metallidurans CH34 chromosome 2, complete sequenceRieske (2Fe-2S) region2e-39163
NC_007794:1504449:1529171152917115302261056Novosphingobium aromaticivorans DSM 12444, complete genomeRieske (2Fe-2S) protein4e-38159
NC_003296:262118:2772982772982783261029Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE VANILLATE O-DEMETHYLASE OXYGENASE SUBUNIT OXIDOREDUCTASE PROTEIN3e-37156
NC_009255:763157:7888837888837898871005Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRieske (2Fe-2S) domain-containing protein5e-31135
NC_008786:1507139:1531947153194715330381092Verminephrobacter eiseniae EF01-2, complete genomeVanillate monooxygenase5e-29128
NC_006677:2575345:2585618258561825867091092Gluconobacter oxydans 621H, complete genomeRing-hydroxylating dioxygenase7e-28125
NC_008536:2079052:2081772208177220828631092Solibacter usitatus Ellin6076, complete genomeRieske (2Fe-2S) domain protein4e-26119
NC_016027:1357659:1379823137982313809141092Gluconacetobacter xylinus NBRC 3288, complete genomering-hydroxylating dioxygenase ferredoxin subunit5e-21102
NC_006677:295253:3074573074573085811125Gluconobacter oxydans 621H, complete genomePutative ferredoxin subunit of ring-hydroxylating dioxygenase4e-21102
NC_010557:207846:2273952273952285161122Burkholderia ambifaria MC40-6 chromosome 3, complete sequenceRieske (2Fe-2S) domain protein1e-20100
NC_014839:12519:2261122611237021092Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceRieske (2Fe-2S) iron-sulfur domain-containing protein1e-1997.8
NC_013209:2414500:2426316242631624273711056Acetobacter pasteurianus IFO 3283-01, complete genomevanillate O-demethylase oxygenase subunit2e-1997.1
NC_017100:2414075:2427523242752324285781056Acetobacter pasteurianus IFO 3283-03, complete genomevanillate O-demethylase oxygenase subunit2e-1997.1
NC_017108:2413000:2424860242486024259151056Acetobacter pasteurianus IFO 3283-12, complete genomevanillate O-demethylase oxygenase subunit2e-1997.1
NC_017111:2413000:2424878242487824259331056Acetobacter pasteurianus IFO 3283-32, complete genomevanillate O-demethylase oxygenase subunit2e-1997.1
NC_017121:2413000:2424865242486524259201056Acetobacter pasteurianus IFO 3283-07, complete genomevanillate O-demethylase oxygenase subunit2e-1997.1
NC_017125:2415500:2427503242750324285581056Acetobacter pasteurianus IFO 3283-22, complete genomevanillate O-demethylase oxygenase subunit2e-1997.1
NC_017146:2416000:2427545242754524286001056Acetobacter pasteurianus IFO 3283-26, complete genomevanillate O-demethylase oxygenase subunit2e-1997.1
NC_010628:675445:6963706963706974461077Nostoc punctiforme PCC 73102, complete genomeRieske (2Fe-2S) domain protein4e-1995.9
NC_010515:1491590:1497806149780614989271122Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceRieske (2Fe-2S) domain protein2e-1894
NC_018581:759932:7906207906207918971278Gordonia sp. KTR9 chromosome, complete genomePhenylpropionate dioxygenase-related ring- hydroxylating dioxygenase, large terminal subunit1e-1791.3
NC_007516:1618033:1620384162038416217541371Synechococcus sp. CC9605, complete genomecell death suppressor protein Lls1-like3e-1789.7
NC_013209:1969734:1989864198986419909821119Acetobacter pasteurianus IFO 3283-01, complete genomering-hydroxylating dioxygenase ferredoxin subunit4e-1789
NC_017100:1972389:1992519199251919936371119Acetobacter pasteurianus IFO 3283-03, complete genomering-hydroxylating dioxygenase ferredoxin subunit4e-1789
NC_017108:1969716:1989846198984619909641119Acetobacter pasteurianus IFO 3283-12, complete genomering-hydroxylating dioxygenase ferredoxin subunit4e-1789
NC_017111:1969704:1989834198983419909521119Acetobacter pasteurianus IFO 3283-32, complete genomering-hydroxylating dioxygenase ferredoxin subunit4e-1789
NC_017121:1969716:1989846198984619909641119Acetobacter pasteurianus IFO 3283-07, complete genomering-hydroxylating dioxygenase ferredoxin subunit4e-1789
NC_017125:1972384:1992514199251419936321119Acetobacter pasteurianus IFO 3283-22, complete genomering-hydroxylating dioxygenase ferredoxin subunit4e-1789
NC_017146:1972396:1992526199252619936441119Acetobacter pasteurianus IFO 3283-26, complete genomering-hydroxylating dioxygenase ferredoxin subunit4e-1789
NC_017150:1877480:1897610189761018987281119Acetobacter pasteurianus IFO 3283-01-42C, complete genomering-hydroxylating dioxygenase ferredoxin subunit4e-1789
NC_020126:6190662:6189664618966461906651002Myxococcus stipitatus DSM 14675, complete genomeRieske family iron-sulfur cluster-binding protein9e-1788.2
NC_010794:2157920:216395021639502164879930Methylacidiphilum infernorum V4, complete genomeRing-hydroxylating dioxygenase, large terminal subunit2e-1687.4
NC_014330:2026193:204255220425522043538987Brachyspira pilosicoli 95/1000 chromosome, complete genomerieske (2Fe-2S) domain-containing protein3e-1686.3
NC_007776:1340741:1361408136140813624271020Synechococcus sp. JA-2-3B'a(2-13), complete genomeiron-sulfur cluster-binding protein, Rieske family3e-1686.3
NC_019908:1225690:122840912284091229395987Brachyspira pilosicoli P43/6/78 chromosome, complete genomerieske (2Fe-2S) domain-containing protein4e-1685.9
NC_008699:2260606:2285841228584122871931353Nocardioides sp. JS614, complete genomeRieske (2Fe-2S) domain protein4e-1685.9
NC_018607:662697:679036679036680022987Brachyspira pilosicoli B2904 chromosome, complete genomerieske (2Fe-2S) domain-containing protein7e-1685.1
NC_018604:789575:805944805944806930987Brachyspira pilosicoli WesB complete genomerieske (2Fe-2S) domain-containing protein9e-1684.7
NC_009481:2081500:2087806208780620888551050Synechococcus sp. WH 7803 chromosome, complete genomeputative dioxygenase4e-1582.8
NC_015711:2542051:2562081256208125632621182Myxococcus fulvus HW-1 chromosome, complete genomeRieske family iron-sulfur cluster-binding protein2e-1480.5
NC_009257:5615:243282432825224897Francisella tularensis subsp. tularensis WY96-3418 chromosome,Rieske (2Fe-2S) domain-containing protein2e-1480.5
NC_014839:12519:2130821308223631056Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceRieske (2Fe-2S) iron-sulfur domain-containing protein3e-1479.7
NC_014118:1592000:1618765161876516200181254Burkholderia sp. CCGE1002 chromosome chromosome 2, completeRieske (2Fe-2S) iron-sulfur domain protein4e-1479.3
NC_015968:1618862:1635112163511216361461035Enterobacter asburiae LF7a chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein6e-1478.6
NC_016514:1627664:1642427164242716435121086Enterobacter cloacae EcWSU1 chromosome, complete genomeVanillate O-demethylase oxygenase subunit8e-1478.2
NC_010623:1961685:1961685196168519629531269Burkholderia phymatum STM815 chromosome 2, complete sequencePhthalate 4,5-dioxygenase1e-1377.4
NC_007974:2097334:2148097214809721494161320Ralstonia metallidurans CH34 chromosome 2, complete sequenceRieske (2Fe-2S) region2e-1377.4
NC_015656:1592021:1594100159410015951971098Frankia symbiont of Datisca glomerata chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein2e-1377
NC_014666:4419693:4437525443752544385651041Frankia sp. EuI1c chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain protein2e-1376.6
NC_008595:1844500:1853614185361418547201107Mycobacterium avium 104, complete genomeoxygenase KshA4e-1375.9
NC_014010:1850500:1896684189668418980661383Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeiron-sulfur protein4e-1375.9
NC_010801:238430:251753251753252727975Burkholderia multivorans ATCC 17616 chromosome 3, completeputative ring-hydroxylating dioxygenase large terminal subunit4e-1375.9
NC_015976:814922:8255108255108267841275Sphingobium sp. SYK-6, complete genome2,2'-dihydroxy-3,3'-dimethoxy-5, 5'-dicarboxybiphenyl O-demethylase oxygenase subunit5e-1272.4
NC_021177:7815791:7817859781785978189531095Streptomyces fulvissimus DSM 40593, complete genomeRieske (2Fe-2S) iron-sulfur domain protein5e-1272.4
NC_009749:77583:792597925979783525Francisella tularensis subsp. holarctica FTA, complete genomeLppA9e-1271.6
NC_010801:238430:255767255767256711945Burkholderia multivorans ATCC 17616 chromosome 3, completeputative ring-hydroxylating dioxygenase large terminal subunit3e-1169.7
NC_015711:3313036:3337563333756333386331071Myxococcus fulvus HW-1 chromosome, complete genomeRieske family iron-sulfur cluster-binding protein7e-1168.6
NC_015566:4547702:4561510456151045626041095Serratia sp. AS12 chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein8e-1168.2
NC_010625:1602191:1633075163307516343911317Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencePhthalate 4,5-dioxygenase4e-1065.9
NC_020064:2728569:2746725274672527478131089Serratia marcescens FGI94, complete genomeRieske (2Fe-2S) domain-containing protein8e-1065.1
NC_010805:530876:5467835467835481141332Burkholderia multivorans ATCC 17616 chromosome 2, completephthalate dioxygenase oxygenase2e-0963.9
NC_010086:1907959:1927190192719019285211332Burkholderia multivorans ATCC 17616 chromosome 2, completeRieske (2Fe-2S) domain protein2e-0963.9
NC_009255:1071868:1087867108786710891981332Burkholderia vietnamiensis G4 chromosome 2, complete sequenceRieske (2Fe-2S) domain-containing protein2e-0963.9
NC_008595:1844500:185560918556091856607999Mycobacterium avium 104, complete genomeiron-sulfur cluster-binding protein, Rieske family protein2e-0963.5
NC_013446:1648556:1682089168208916834201332Comamonas testosteroni CNB-2, complete genomeRieske iron-sulfur protein4e-0962.8
NC_014366:354000:3558943558943569851092Gamma proteobacterium HdN1, complete genomeRieske (2Fe-2S) region4e-0962.8
NC_012856:2931995:2945239294523929465701332Ralstonia pickettii 12D chromosome 1, complete genomeRieske (2Fe-2S) domain protein4e-0962.8
NC_010552:2454776:2481524248152424826361113Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceRieske (2Fe-2S) domain protein5e-0962.4
NC_014010:1850500:1889860188986018912151356Candidatus Puniceispirillum marinum IMCC1322 chromosome, completeiron-sulfur protein6e-0962
NC_005071:835005:8449938449938463031311Prochlorococcus marinus str. MIT 9313, complete genomeRieske iron-sulfur protein 2Fe-2S subunit8e-0961.6
NC_008595:2546696:2579790257979025808031014Mycobacterium avium 104, complete genomeiron-sulfur cluster-binding protein, Rieske family protein1e-0860.8
NC_007953:1043957:1043957104395710451201164Burkholderia xenovorans LB400 chromosome 3, complete sequencePutative Rieske-type ring dioxygenase1e-0860.8
NC_016948:3104403:310971031097103110705996Mycobacterium intracellulare MOTT-64 chromosome, complete genomeiron-sulfur cluster-binding protein, Rieske family protein2e-0860.8
NC_015312:1220500:123144512314451231798354Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeRieske (2Fe-2S) iron-sulfur domain-containing protein2e-0860.1
NC_003911:3864852:3887290388729038883991110Silicibacter pomeroyi DSS-3, complete genomeRieske 2Fe-2S domain protein8e-0755.1