Pre_GI: BLASTP Hits

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Query: NC_007952:495000:513099 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 513099, End: 513941, Length: 843

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008313:2629281:264064026406402641500861Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein2e-84312
NC_014323:3195178:319761631976163198476861Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein1e-82306
NC_007953:572926:594489594489595337849Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein2e-68258
NC_010067:2488141:250106625010662501911846Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-58224
NC_017904:1763015:178117517811751782044870Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-46187
NC_016043:1603499:160467916046791605524846Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein9e-47187
NC_015259:485015:556989556989557807819Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHypothetical cytosolic protein6e-46184
NC_011094:973140:981590981590981853264Salmonella enterica subsp. enterica serovar Schwarzengrund strMaoC like domain-containing protein1e-0963.9
NC_010102:2178594:218959821895982189861264Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0963.5
NC_016831:2108557:211955821195582119821264Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-0962.8