Pre_GI: BLASTP Hits

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Query: NC_007952:3283394:3305582 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3305582, End: 3306793, Length: 1212

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011369:1135592:1184693118469311859221230Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, completemajor facilitator superfamily protein2e-94345
NC_016147:1672482:1682581168258116837891209Pseudoxanthomonas spadix BD-a59 chromosome, complete genomemajor facilitator transporter2e-92339
NC_012489:1797032:1813745181374518149351191Gemmatimonas aurantiaca T-27, complete genomeputative major facilitator superfamily protein3e-88325
NC_005125:3981987:4006677400667740078611185Gloeobacter violaceus PCC 7421, complete genomehypothetical protein7e-66251
NC_016024:1185388:1184192118419211853911200Candidatus Chloracidobacterium thermophilum B chromosome chromosomemajor facilitator superfamily protein2e-37157
NC_014209:1363151:1364067136406713651971131Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,major facilitator superfamily MFS_12e-36153
NC_013921:1344000:1344021134402113451511131Thermoanaerobacter italicus Ab9 chromosome, complete genomemajor facilitator superfamily MFS_16e-36152
NC_016894:77853:9873298732998981167Acetobacterium woodii DSM 1030 chromosome, complete genomemajor facilitator superfamily transporter2e-34147
NC_010321:1361748:1361748136174813628781131Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completemajor facilitator transporter2e-34147
NC_014964:1353939:1353939135393913550691131Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completemajor facilitator superfamily protein2e-34147
NC_014538:1125000:1144912114491211460421131Thermoanaerobacter sp. X513 chromosome, complete genomemajor facilitator superfamily protein2e-34147
NC_015958:1465631:1465631146563114667611131Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomemajor facilitator superfamily protein2e-34146
NC_011297:833387:8333878333878345531167Dictyoglomus thermophilum H-6-12, complete genomepermease of the major facilitator superfamily4e-32139
NC_011661:998562:1000773100077310019391167Dictyoglomus turgidum DSM 6724, complete genomemajor facilitator superfamily MFS_13e-31136
NC_020541:2191600:2197788219778821989691182Rhodanobacter sp. 2APBS1, complete genomeMajor Facilitator Superfamily transporter2e-29130
NC_006624:1448165:1449887144988714510831197Thermococcus kodakarensis KOD1, complete genomepredcited permease, major facilitator superfamily1e-26120
NC_007908:4069150:4077067407706740782871221Rhodoferax ferrireducens T118, complete genomemajor facilitator superfamily MFS_15e-24112
NC_013093:1909305:1921062192106219223241263Actinosynnema mirum DSM 43827, complete genomemajor facilitator superfamily MFS_16e-22105
NC_015416:621513:6262316262316273881158Methanosaeta concilii GP-6 chromosome, complete genomemajor facilitator family transporter2e-21103
NC_012115:691154:7083067083067094151110Nautilia profundicola AmH, complete genomeputative permeases of the major facilitator superfamily7e-21102
NC_014972:1923035:1927065192706519283361272Desulfobulbus propionicus DSM 2032 chromosome, complete genomemajor facilitator superfamily protein4e-1789.4
NC_003551:1113424:1114332111433211154441113Methanopyrus kandleri AV19, complete genomePermease of the major facilitator superfamily2e-0757.4
NC_009376:1579332:1586746158674615878401095Pyrobaculum arsenaticum DSM 13514 chromosome, complete genomemajor facilitator superfamily transporter8e-0755.5
NC_019748:4129500:4139504413950441406761173Stanieria cyanosphaera PCC 7437, complete genomemajor facilitator superfamily MFS_14e-0653.1
NC_016582:11380000:1139966811399668114008761209Streptomyces bingchenggensis BCW-1 chromosome, complete genomemajor facilitator superfamily transporter5e-0652.8