Pre_GI: BLASTP Hits

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Query: NC_007952:3283394:3288646 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3288646, End: 3288975, Length: 330

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009952:592000:604086604086604418333Dinoroseobacter shibae DFL 12, complete genomeNIPSNAP family containing protein4e-1786.7
NC_014641:20103:282822828228596315Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceNIPSNAP family protein5e-1579.7
NC_007951:3655088:366581336658133666127315Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein5e-1579.7
NC_006350:1909639:191118119111811911495315Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein6e-1579.3
NC_007434:2449721:247086924708692471183315Burkholderia pseudomallei 1710b chromosome I, complete sequenceNIPSNAP superfamily6e-1579.3
NC_015556:1188500:120686912068691207183315Pseudomonas fulva 12-X chromosome, complete genomeNIPSNAP family containing protein3e-1477.4
NC_007951:925442:944333944333944662330Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein1e-0755.5