Pre_GI: BLASTP Hits

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Query: NC_007952:3238241:3246478 Burkholderia xenovorans LB400 chromosome 2, complete sequence

Start: 3246478, End: 3246777, Length: 300

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010623:1871492:188086618808661881597732Burkholderia phymatum STM815 chromosome 2, complete sequencehypothetical protein1e-2098.6
NC_010622:249625:297155297155297871717Burkholderia phymatum STM815 chromosome 1, complete sequencehypothetical protein4e-1270.1
NC_007951:925442:933365933365934096732Burkholderia xenovorans LB400 chromosome 1, complete sequencehypothetical protein9e-0752.4
NC_014540:2828299:284792128479212848658738Burkholderia sp. CCGE1003 chromosome 2, complete sequencehypothetical protein2e-0651.2
NC_007952:3283394:331477333147733315504732Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein7e-0649.3