Pre_GI: BLASTP Hits

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Query: NC_007951:570500:585227 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 585227, End: 586225, Length: 999

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012968:239476:261008261008261964957Methylotenera mobilis JLW8, complete genomeplasmid replicase1e-62239
NC_010682:460523:471980471980472939960Ralstonia pickettii 12J chromosome 1, complete sequenceplasmid replicase5e-42171
NC_007275:1:30430416171314Pseudomonas syringae pv. phaseolicola 1448A small plasmid, completeReplicase family family2e-28126
NC_012796:3600630:3651169365116936524311263Desulfovibrio magneticus RS-1, complete genomeputative rep protein1e-21104
NC_012796:3600630:3629647362964736307351089Desulfovibrio magneticus RS-1, complete genomeputative rep protein2e-1996.7
NC_012125:4716000:472583247258324726707876Salmonella enterica subsp. enterica serovar Paratyphi C strainreplication protein3e-1996.3
NC_012796:77071:9217792177932831107Desulfovibrio magneticus RS-1, complete genomehypothetical protein1e-1790.9
NC_016822:2940000:294807429480742948640567Shigella sonnei 53G, complete genomehypothetical protein2e-1273.2