Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:4741620:4751120 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4751120, End: 4753669, Length: 2550

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010681:4299979:4303234430323443057712538Burkholderia phytofirmans PsJN chromosome 1, complete sequencehypothetical protein01478
NC_016629:3929716:3937064393706439395502487Desulfovibrio africanus str. Walvis Bay chromosome, completesubtilisin-like serine protease4e-139496
NC_009665:5072413:5097767509776751002472481Shewanella baltica OS185 chromosome, complete genomehypothetical protein2e-134480
NC_016745:2028424:2047791204779120502742484Oceanimonas sp. GK1 chromosome, complete genomehypothetical protein2e-133477
NC_007404:1776147:1782860178286017853522493Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein1e-129464
NC_008751:3214000:3223218322321832257102493Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomesubtilisin-like serine protease1e-126454
NC_009656:5475540:5486148548614854886372490Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-126454
NC_008346:2579756:2592894259289425953652472Syntrophomonas wolfei subsp. wolfei str. Goettingen, completesubtilisin-like serine protease2e-122440
NC_013441:4539035:4555323455532345578632541Gordonia bronchialis DSM 43247, complete genomehypothetical protein1e-119431
NC_009092:4585784:4595573459557345981162544Shewanella loihica PV-4, complete genomehypothetical protein9e-120431
NC_008595:3914463:3920209392020939227432535Mycobacterium avium 104, complete genomeY4bN protein3e-119430
NC_011083:1524337:1533251153325115357942544Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Y4bN protein3e-119430
NC_016642:4517478:4530050453005045325692520Pseudovibrio sp. FO-BEG1 chromosome, complete genomehypothetical protein2e-118427
NC_011094:380428:3886773886773911212445Salmonella enterica subsp. enterica serovar Schwarzengrund strY4bN protein1e-111404
NC_013209:2582878:2584321258432125864772157Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein3e-108393
NC_015578:465814:4721994721994739741776Treponema primitia ZAS-2 chromosome, complete genomeY4bN protein3e-107390
NC_016610:3297080:3304163330416333066792517Tannerella forsythia ATCC 43037 chromosome, complete genomehypothetical protein5e-106386
NC_013510:5499447:5537542553754255400492508Thermomonospora curvata DSM 43183, complete genomehypothetical protein9e-104378
NC_014391:6848475:6857855685785568603712517Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein3e-102373
NC_014666:8459724:8467884846788484704512568Frankia sp. EuI1c chromosome, complete genomehypothetical protein4e-90333
NC_007508:689046:6957526957526972241473Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein1e-84315
NC_008752:3902637:3907665390766539102172553Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein1e-83311
NC_020209:4768500:4782254478225447833811128Pseudomonas poae RE*1-1-14, complete genomehypothetical protein4e-74280
NC_009997:5188221:5213632521363252147621131Shewanella baltica OS195, complete genomehypothetical protein8e-69262
NC_014370:885937:9421549421549445562403Prevotella melaninogenica ATCC 25845 chromosome chromosome I,peptidase families S8 and S533e-64247
NC_009997:5188221:5215981521598152173991419Shewanella baltica OS195, complete genomehypothetical protein8e-57222
NC_002696:2941644:2957434295743429586181185Caulobacter crescentus CB15, complete genomehypothetical protein8e-52206
NC_011916:2967624:2983414298341429845981185Caulobacter crescentus NA1000 chromosome, complete genomehypothetical protein8e-52206
NC_007508:689046:6946856946856958511167Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein6e-34146
NC_014623:9363409:936703693670369367503468Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-1998.2
NC_002927:960369:9736529736529760062355Bordetella bronchiseptica RB50, complete genomeputative serine protease3e-1584.7
NC_015573:1729057:1741078174107817433962319Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin7e-1583.2
NC_015422:1876102:1889192188919218913902199Alicycliphilus denitrificans K601 chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin8e-1583.2
NC_017904:5543490:555226555522655552642378Mycobacterium sp. MOTT36Y chromosome, complete genomeY4bN protein2e-1379
NC_015847:808931:8089318089318113722442Methanococcus maripaludis XI chromosome, complete genomepeptidase S8/S53 subtilisin kexin sedolisin8e-1376.6
NC_013851:3142182:3152457315245731547452289Allochromatium vinosum DSM 180 chromosome, complete genomepeptidase S8 and S53 subtilisin kexin sedolisin3e-1274.3