Pre_GI: BLASTP Hits

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Query: NC_007951:4576825:4599323 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 4599323, End: 4599607, Length: 285

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013960:1693643:170834117083411708640300Nitrosococcus halophilus Nc4 chromosome, complete genomemercuric transport protein periplasmic component2e-1890.9
NC_012483:1408500:144730814473081447598291Acidobacterium capsulatum ATCC 51196, complete genomemercuric transport protein periplasmic component2e-1890.9
NC_009656:115390:121405121405121680276Pseudomonas aeruginosa PA7 chromosome, complete genomemercuric transport periplasmic protein6e-1786.3
NC_009434:3611738:370708137070813707356276Pseudomonas stutzeri A1501, complete genomeperiplasmic transport protein; MerP6e-1786.3
NC_010943:2422838:244402324440232444301279Stenotrophomonas maltophilia K279a, complete genomeputative mercuric transport protein periplasmic component precursor (periplasmic mercury ion-binding protein) (mercury scavenger protein)8e-1785.5
NC_010501:2609567:261292626129262613201276Pseudomonas putida W619, complete genomemercuric transport protein periplasmic component3e-1580.5
NC_008463:1293079:131046013104601310735276Pseudomonas aeruginosa UCBPP-PA14, complete genomePeriplasmic mercuric ion binding protein, MerP3e-1580.5
NC_015733:5909821:593259859325985932873276Pseudomonas putida S16 chromosome, complete genomeperiplasmic mercury ion binding protein3e-1580.5
NC_015740:1291739:129764412976441297919276Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completehypothetical protein3e-1580.5
NC_008573:195317:202785202785203060276Shewanella sp. ANA-3 plasmid 1, complete sequencemercuric transport protein periplasmic component1e-1478.2
NC_008344:1:348783487835153276Nitrosomonas eutropha C91, complete genomemercuric transport protein periplasmic component1e-1478.2
NC_008341:29038:435804358043855276Nitrosomonas eutropha C91 plasmid1, complete sequencemercuric transport protein periplasmic component2e-1477.8
NC_008344:1364142:137049013704901370765276Nitrosomonas eutropha C91, complete genomemercuric transport protein periplasmic component2e-1477.8
NC_008347:2515921:253935025393502539727378Maricaulis maris MCS10, complete genomeHeavy metal transport/detoxification protein2e-1477.8
NC_017986:1862408:187755018775501877825276Pseudomonas putida ND6 chromosome, complete genomeMerP protein3e-1477
NC_008740:257434:281354281354281650297Marinobacter aquaeolei VT8, complete genomemercuric transport protein periplasmic component5e-1476.6
NC_008573:195317:229627229627229902276Shewanella sp. ANA-3 plasmid 1, complete sequencemercuric transport protein periplasmic component4e-1476.6
NC_003384:109036:115439115439115714276Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative mercuric transport protein periplasmic binding protein4e-1476.6
NC_015422:3513689:351893535189353519210276Alicycliphilus denitrificans K601 chromosome, complete genomemercuric transport protein periplasmic component7e-1475.9
NC_004757:905417:918812918812919087276Nitrosomonas europaea ATCC 19718, complete genomeMercury scavenger protein:Heavy-metal-associated domain1e-1375.1
NC_016860:4055117:408805140880514088326276Salmonella enterica subsp. enterica serovar Typhimurium strmercury resistance operon protein MerP1e-1374.7
NC_009349:78000:830238302383298276Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, completemercuric transport protein periplasmic component1e-1374.7
NC_009656:44500:104355104355104630276Pseudomonas aeruginosa PA7 chromosome, complete genomemercuric transport periplasmic protein3e-1373.9
NC_009720:870194:891372891372891668297Xanthobacter autotrophicus Py2, complete genomeheavy metal transport/detoxification protein7e-1372.8
NC_003384:157158:174179174179174454276Salmonella enterica subsp. enterica serovar Typhi str. CT18 plasmidputative mercuric transport protein periplasmic binding protein5e-1372.8
NC_013365:92973:100057100057100332276Escherichia coli O111:H- str. 11128 plasmid pO111_1, completemercuric transport protein periplasmic componentprecursor MerP5e-1372.8
NC_009668:445134:486487486487486780294Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceheavy metal transport/detoxification protein3e-1270.5
NC_010084:2484000:248529724852972485581285Burkholderia multivorans ATCC 17616 chromosome 1, completemercuric transport protein periplasmic component4e-1270.1
NC_010804:996837:103919210391921039476285Burkholderia multivorans ATCC 17616 chromosome 1, completeperiplasmic mercuric ion-binding protein4e-1270.1
NC_008782:1510000:153237215323721532656285Acidovorax sp. JS42, complete genomemercuric transport protein periplasmic component7e-1269.3
NC_011386:3723019:372863837286383728922285Oligotropha carboxidovorans OM5, complete genomemercuric transport protein periplasmic component1e-1168.2
NC_009720:3210387:322359032235903223886297Xanthobacter autotrophicus Py2, complete genomemercuric transport protein periplasmic component1e-1065.1
NC_011138:3182807:320641332064133206598186Alteromonas macleodii 'Deep ecotype', complete genomeputative mercuric transport protein periplasmic binding protein4e-0960.1
NC_013939:295220:3054223054223078812460Deferribacter desulfuricans SSM1, complete genomeheavy-metal transporting P-type ATPase3e-0857.4
NC_015851:89006:8900689006915942589Acidithiobacillus caldus SM-1 megaplasmid, complete sequenceheavy metal translocating P-type ATPase4e-0857
NC_011992:1038985:1039537103953710419452409Acidovorax ebreus TPSY, complete genomeheavy metal translocating P-type ATPase4e-0856.6
NC_008010:449652:4615564615564640662511Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceHeavy metal translocating P-type ATPase6e-0856.2
NC_010571:5650806:565596956559695656559591Opitutus terrae PB90-1, complete genomeHeavy metal transport/detoxification protein7e-0855.8
NC_015164:3099097:3113987311398731165212535Bacteroides salanitronis DSM 18170 chromosome, complete genomecopper-translocating P-type ATPase1e-0755.1
NC_015160:3996764:3996764399676439992412478Odoribacter splanchnicus DSM 20712 chromosome, complete genomecopper-translocating P-type ATPase1e-0755.1
NC_017079:2634623:2649541264954126516222082Caldilinea aerophila DSM 14535 = NBRC 104270, complete genomecopper-transporting ATPase CopA2e-0754.3
NC_008701:1310857:1310857131085713132322376Pyrobaculum islandicum DSM 4184, complete genomeheavy metal translocating P-type ATPase3e-0753.9
NC_008818:1244612:1274486127448612769592474Hyperthermus butylicus DSM 5456, complete genome3e-0753.9
NC_014910:3458475:3474132347413234764682337Alicycliphilus denitrificans BC chromosome, complete genomeheavy metal translocating p-type atpase3e-0753.5
NC_015422:1163752:1167885116788511702212337Alicycliphilus denitrificans K601 chromosome, complete genomeheavy metal translocating P-type ATPase4e-0753.5
NC_008607:11663:1166311663140232361Pelobacter propionicus DSM 2379 plasmid pPRO1, complete sequenceheavy metal translocating P-type ATPase4e-0753.5
NC_013849:627811:6481156481156505412427Ferroglobus placidus DSM 10642 chromosome, complete genomeheavy metal translocating P-type ATPase9e-0752.4
NC_008782:1136732:1137248113724811396892442Acidovorax sp. JS42, complete genomeheavy metal translocating P-type ATPase8e-0752.4
NC_014376:2766326:2787809278780927902892481Clostridium saccharolyticum WM1 chromosome, complete genomecopper-translocating P-type ATPase1e-0652
NC_013771:803042:8145698145698168182250Cyanobacterium UCYN-A, complete genomecopper/silver-translocating P-type ATPase2e-0651.6
NC_014831:1906691:1906691190669119095162826Thermaerobacter marianensis DSM 12885 chromosome, complete genomeheavy metal translocating P-type ATPase2e-0651.2
NC_013422:991500:9922099922099947162508Halothiobacillus neapolitanus c2, complete genomeheavy metal translocating P-type ATPase2e-0651.2
NC_016047:2658000:2670849267084926732872439Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completecopper-translocating P-type ATPase2e-0651.2
NC_016627:2524307:253323525332352533447213Clostridium clariflavum DSM 19732 chromosome, complete genomecopper ion binding protein3e-0650.8
NC_011529:766292:7727287727287751302403Thermococcus onnurineus NA1, complete genomeheavy-metal transporting P-type ATPase2e-0650.8
NC_013205:1123280:116985211698521170058207Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446,Heavy metal transport/detoxification protein2e-0650.8
NC_004757:905417:9166379166379183221686Nitrosomonas europaea ATCC 19718, complete genomemerA; mercuric reductase4e-0650.1
NC_021182:4022894:4025380402538040278362457Clostridium pasteurianum BC1, complete genomecopper/silver-translocating P-type ATPase6e-0649.7
NC_012883:1522920:1533381153338115357802400Thermococcus sibiricus MM 739, complete genomeHeavy-metal transporting P-type ATPase7e-0649.3
NC_008593:1513107:1516759151675915192062448Clostridium novyi NT, complete genomecopper-translocating P-type ATPase7e-0649.3
NC_015425:1687050:1692760169276016952072448Clostridium botulinum BKT015925 chromosome, complete genomeheavy metal translocating P-type ATPase7e-0649.3