Pre_GI: BLASTP Hits

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Query: NC_007951:3655088:3660327 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3660327, End: 3661184, Length: 858

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010676:2869936:287269128726912873548858Burkholderia phytofirmans PsJN chromosome 2, complete sequenceAAA ATPase4e-145514
NC_010681:121647:145341145341146198858Burkholderia phytofirmans PsJN chromosome 1, complete sequenceAAA ATPase4e-145514
NC_010676:2720068:273871527387152739572858Burkholderia phytofirmans PsJN chromosome 2, complete sequenceAAA ATPase4e-145514
NC_019902:97987:113115113115113960846Thioalkalivibrio nitratireducens DSM 14787, complete genomeGeneral secretion pathway protein A2e-101369
NC_007973:2150962:216879321687932169626834Ralstonia metallidurans CH34 chromosome 1, complete sequenceATPase9e-89327
NC_007973:2773427:277530927753092776142834Ralstonia metallidurans CH34 chromosome 1, complete sequenceATPase9e-89327
NC_007973:3065632:308455030845503085383834Ralstonia metallidurans CH34 chromosome 1, complete sequenceATPase9e-89327
NC_007974:2048000:207518320751832076016834Ralstonia metallidurans CH34 chromosome 2, complete sequenceATPase9e-89327
NC_010170:3944228:396840239684023968863462Bordetella petrii, complete genomeputative ATPase fragment4e-79294
NC_008609:3119502:312183731218373122667831Pelobacter propionicus DSM 2379, complete genomeputative ATPase3e-65248
NC_008609:1394377:140705714070571407887831Pelobacter propionicus DSM 2379, complete genomeputative ATPase3e-65248
NC_008609:2446246:245182524518252452655831Pelobacter propionicus DSM 2379, complete genomeputative ATPase3e-65248
NC_008609:975867:991099991099991929831Pelobacter propionicus DSM 2379, complete genomeputative ATPase3e-65248
NC_012108:2159230:218028121802812181126846Desulfobacterium autotrophicum HRM2, complete genomeExeA18e-61233
NC_012108:4971086:501666650166665017511846Desulfobacterium autotrophicum HRM2, complete genomeExeA58e-61233
NC_008609:1394377:139506213950621395994933Pelobacter propionicus DSM 2379, complete genomeputative ATPase1e-59229
NC_010170:3944228:397144539714453971885441Bordetella petrii, complete genomeputative ATPase fragment7e-59227
NC_011769:820521:8276288276288288151188Desulfovibrio vulgaris str. 'Miyazaki F', complete genomesecretion ATPase, PEP-CTERM locus subfamily5e-1581.6
NC_010321:35855:543195431955119801Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeATPase AAA2e-1376.6
NC_014964:35862:543265432655126801Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeAAA ATPase2e-1376.6
NC_010321:2276000:227885222788522279652801Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeATPase AAA2e-1376.3
NC_014152:554656:559323559323560126804Thermincola sp. JR, complete genomeAAA ATPase3e-1272.8
NC_014152:2056991:207172820717282072531804Thermincola sp. JR, complete genomeAAA ATPase3e-1272.8
NC_016023:875416:889187889187889987801Bacillus coagulans 36D1 chromosome, complete genomeAAA ATPase2e-1170.1
NC_007517:2241104:2266711226671122678681158Geobacter metallireducens GS-15, complete genomeATPase4e-1168.9
NC_010162:7824878:782888878288887829703816Sorangium cellulosum 'So ce 56', complete genomegeneral secretion pathway protein A fragment9e-1167.8
NC_011146:1998981:2043420204342020445381119Geobacter bemidjiensis Bem, complete genomesecretion ATPase, PEP-CTERM locus subfamily4e-1065.5
NC_014824:366000:384946384946385761816Ruminococcus albus 7 plasmid pRUMAL01, complete sequenceAAA ATPase6e-1065.1
NC_010337:147664:173180173180173980801Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-0963.5
NC_015388:269301:3081923081923093311140Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeAAA ATPase2e-0963.2
NC_014216:2027017:2028593202859320295971005Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomeAAA ATPase2e-0963.2
NC_020210:1704500:173031717303171731117801Geobacillus sp. GHH01, complete genomehypothetical protein7e-0961.6
NC_009454:1246393:125843212584321259232801Pelotomaculum thermopropionicum SI, complete genometype II secretory pathway, component ExeA6e-0961.6
NC_006510:887545:897613897613898413801Geobacillus kaustophilus HTA426, complete genomehypothetical protein6e-0961.6
NC_015660:1896904:189923518992351900035801Geobacillus thermoglucosidasius C56-YS93 chromosome, completeAAA ATPase6e-0961.6
NC_007503:2243902:225209922520992253049951Carboxydothermus hydrogenoformans Z-2901, complete genomegeneral secretion pathway domain protein6e-0961.6
NC_006510:795973:807415807415808215801Geobacillus kaustophilus HTA426, complete genomehypothetical protein6e-0961.6
NC_020210:1704500:172380617238061724606801Geobacillus sp. GHH01, complete genomehypothetical protein6e-0961.6
NC_014973:1767798:178322217832221784106885Geobacter sp. M18 chromosome, complete genomeAAA ATPase5e-0961.6
NC_007503:2338110:234166423416642342467804Carboxydothermus hydrogenoformans Z-2901, complete genomeISChy3, orf32e-0860.1
NC_007503:1111457:111470311147031115506804Carboxydothermus hydrogenoformans Z-2901, complete genomeISChy3, orf32e-0860.1
NC_007298:2568851:2589019258901925900951077Dechloromonas aromatica RCB, complete genomeATPas2e-0860.1
NC_009483:2640403:2732430273243027336021173Geobacter uraniireducens Rf4 chromosome, complete genomeATPase AAA2e-0859.7
NC_006177:2398482:243411924341192434955837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-0859.7
NC_006177:2883476:291682329168232917659837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-0859.7
NC_006177:46745:682856828569121837Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein2e-0859.7
NC_008435:1215437:123744212374421238284843Rhodopseudomonas palustris BisA53, complete genomeAAA ATPase3e-0859.3
NC_020210:1275031:131571213157121316512801Geobacillus sp. GHH01, complete genomehypothetical protein4e-0858.9
NC_015572:1421782:1448291144829114493161026Methylomonas methanica MC09 chromosome, complete genomesecretion ATPase, PEP-CTERM locus subfamily4e-0858.9
NC_014220:1670000:167619116761911676991801Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomehypothetical protein3e-0858.9
NC_020210:788639:793670793670794470801Geobacillus sp. GHH01, complete genomehypothetical protein5e-0858.5
NC_015565:287900:319804319804320561758Desulfotomaculum carboxydivorans CO-1-SRB chromosome, complete7e-0858.2
NC_013194:2020134:203774220377422038536795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase1e-0757.8
NC_013194:1040197:105806810580681058862795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase1e-0757.8
NC_013194:4964000:499775549977554998549795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase1e-0757.8
NC_013194:1631134:163198616319861632780795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase1e-0757.8
NC_008789:1641774:1645072164507216461871116Halorhodospira halophila SL1, complete genomeAAA ATPase9e-0857.8
NC_013194:69634:935609356094354795Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeAAA ATPase1e-0757.4
NC_018870:1417851:143554214355421436297756Thermacetogenium phaeum DSM 12270 chromosome, complete genomeAAA+ type ATPase1e-0757
NC_015565:2408669:241362924136292414429801Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeAAA ATPase2e-0757
NC_015724:166246:176974176974177768795Cupriavidus necator N-1 plasmid BB2p, complete sequenceATPase AAA2e-0756.6
NC_020210:2133996:218424821842482185048801Geobacillus sp. GHH01, complete genomeAAA ATPase3e-0755.8
NC_016593:3402205:340638334063833407183801Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeGeneral secretion pathway domain protein4e-0755.5
NC_010337:1561430:158468015846801585324645Heliobacterium modesticaldum Ice1, complete genomehypothetical protein4e-0755.5
NC_014915:2387639:239297823929782393778801Geobacillus sp. Y412MC52 chromosome, complete genomeAAA ATPase5e-0755.1
NC_013411:334549:345709345709346509801Geobacillus sp. Y412MC61, complete genomeAAA ATPase5e-0755.1
NC_019897:938921:958126958126958929804Thermobacillus composti KWC4 chromosome, complete genometype II secretory pathway protein ExeA1e-0653.9
NC_019897:3810000:384007138400713840874804Thermobacillus composti KWC4 chromosome, complete genometype II secretory pathway protein ExeA1e-0653.9
NC_019897:2004050:200777120077712008574804Thermobacillus composti KWC4 chromosome, complete genometype II secretory pathway protein ExeA1e-0653.9
NC_014315:3004125:3022970302297030244721503Nitrosococcus watsoni C-113 chromosome, complete genomepeptidoglycan-binding lysin domain-containing protein1e-0653.9
NC_014910:755192:7778727778727789721101Alicycliphilus denitrificans BC chromosome, complete genomesecretion atpase, pep-cterm locus subfamily1e-0653.5
NC_015422:704500:7171997171997182991101Alicycliphilus denitrificans K601 chromosome, complete genomesecretion ATPase1e-0653.5
NC_013939:1001974:100416310041631004975813Deferribacter desulfuricans SSM1, complete genomegeneral secretion pathway protein A2e-0653.1
NC_020541:3156500:3218681321868132197451065Rhodanobacter sp. 2APBS1, complete genomeputative secretion ATPase, PEP-CTERM locus subfamily3e-0652.8
NC_010524:3914880:3916740391674039192352496Leptothrix cholodnii SP-6, complete genomesecretion ATPase, PEP-CTERM locus subfamily5e-0651.6
NC_015554:817500:8194968194968205631068Alteromonas sp. SN2 chromosome, complete genomeputative general secretion pathway protein A9e-0651.2