Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:3631772:3650281 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 3650281, End: 3651063, Length: 783

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010170:1580832:158188615818861582668783Bordetella petrii, complete genomecatechol 1,2-dioxygenase6e-143506
NC_014641:20103:240172401724772756Achromobacter xylosoxidans A8 plasmid pA81, complete sequencechlorocatechol 1,2-dioxygenase5e-95347
NC_010170:3944228:395768139576813958436756Bordetella petrii, complete genomecatechol 1,2-dioxygenase9e-95346
NC_007337:10464:304033040331164762Ralstonia eutropha JMP134 plasmid 1, complete sequenceCatechol dioxygenase, N-terminal2e-92338
NC_007337:10464:227782277823545768Ralstonia eutropha JMP134 plasmid 1, complete sequenceCatechol dioxygenase, N-terminal5e-85314
NC_015312:3290887:330300033030003303854855Pseudonocardia dioxanivorans CB1190 chromosome, complete genomeCatechol 1,2-dioxygenase3e-37155
NC_013757:1343396:135837413583741359225852Geodermatophilus obscurus DSM 43160, complete genomecatechol 1,2-dioxygenase2e-33142
NC_020209:1949500:197033019703301971259930Pseudomonas poae RE*1-1-14, complete genomecatechol 1,2-dioxygenase7e-30130
NC_010552:293703:296273296273297145873Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceintradiol ring-cleavage dioxygenase2e-29129
NC_007348:752692:776546776546777451906Ralstonia eutropha JMP134 chromosome 2, complete sequenceCatechol 1,2-dioxygenase2e-29129
NC_008391:2253188:225428422542842255156873Burkholderia cepacia AMMD chromosome 2, complete sequenceintradiol ring-cleavage dioxygenase4e-29128
NC_008391:111217:126199126199127080882Burkholderia cepacia AMMD chromosome 2, complete sequenceCatechol 1,2-dioxygenase3e-28125
NC_007492:3384077:339866733986673399593927Pseudomonas fluorescens PfO-1, complete genomeIntradiol ring-cleavage dioxygenase3e-27122
NC_020453:1881904:188190418819041882788885Agromonas oligotrophica S58 DNA, complete genomehypothetical protein7e-27120
NC_007948:360199:373453373453374319867Polaromonas sp. JS666, complete genomeintradiol ring-cleavage dioxygenase3e-26119
NC_010512:110932:125497125497126447951Burkholderia cenocepacia MC0-3 chromosome 3, complete sequencecatechol 1,2-dioxygenase1e-25117
NC_011002:564654:566615566615567556942Burkholderia cenocepacia J2315 chromosome 3, complete sequencecatechol 1,2-dioxygenase 22e-25116
NC_002947:4167500:423583342358334236768936Pseudomonas putida KT2440, complete genomecatechol 1,2-dioxygenase2e-25115
NC_017986:5833819:583858458385845839519936Pseudomonas putida ND6 chromosome, complete genomeCatA6e-25114
NC_010552:592154:616424616424617326903Burkholderia ambifaria MC40-6 chromosome 2, complete sequencecatechol 1,2-dioxygenase3e-23108
NC_016943:2391366:240817124081712409109939Blastococcus saxobsidens DD2, complete genomehydroxyquinol 1,2-dioxygenase4e-23108
NC_008268:3162824:316799531679953168951957Rhodococcus sp. RHA1, complete genomeprobable catechol 1,2-dioxygenase6e-23107
NC_016585:1004000:100405610040561004976921Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencecatechol 1,2-dioxygenase7e-23107
NC_015727:1294532:129863312986331299535903Cupriavidus necator N-1 plasmid BB1p, complete sequencecatechol 1,2-dioxygenase CatA1e-22107
NC_015726:1813961:181723318172331818147915Cupriavidus necator N-1 chromosome 1, complete sequencecatechol 1,2-dioxygenase CatA4e-21102
NC_008596:4104476:411306341130634113947885Mycobacterium smegmatis str. MC2 155, complete genomehydroxyquinol 1,2-dioxygenase3e-21102
NC_011740:1494796:151755215175521518478927Escherichia fergusonii ATCC 35469, complete genomeCatechol 1,2-dioxygenase (1,2-CTD)1e-20100
NC_008726:4725389:472538947253894726282894Mycobacterium vanbaalenii PYR-1, complete genomeintradiol ring-cleavage dioxygenase1e-1996.7
NC_015381:1623587:166557016655701666448879Burkholderia gladioli BSR3 chromosome 1, complete sequencehydroxyquinol 1,2-dioxygenase8e-1890.9
NC_011894:2184956:218559121855912186319729Methylobacterium nodulans ORS 2060, complete genomeprotocatechuate 3,4-dioxygenase, beta subunit8e-1064.3
NC_008010:105665:104950104950105675726Deinococcus geothermalis DSM 11300 plasmid 1, complete sequenceProtocatechuate 3,4-dioxygenase, beta subunit2e-0652.8
NC_015379:6226661:625024862502486250967720Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative protocatechuate 34-dioxygenase, beta-chain3e-0652.4