Pre_GI: BLASTP Hits

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Query: NC_007951:2087385:2100898 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 2100898, End: 2101818, Length: 921

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:210240:254011254011254895885Streptomyces avermitilis MA-4680, complete genomepyrophosphatase1e-58226
NC_008269:1067082:107819910781991079179981Rhodococcus sp. RHA1 plasmid pRHL1, complete sequencehypothetical protein9e-51200
NC_007948:5026122:5035932503593250371461215Polaromonas sp. JS666, complete genomehypothetical protein1e-40166
NC_014640:6815264:6833618683361868348981281Achromobacter xylosoxidans A8 chromosome, complete genomeMazG nucleotide pyrophosphohydrolase1e-36154
NC_014623:7331860:7349667734966773507401074Stigmatella aurantiaca DW4/3-1 chromosome, complete genomepyrophosphatase3e-36152
NC_008322:1186000:1197812119781211989721161Shewanella sp. MR-7, complete genomehypothetical protein1e-34147
NC_008782:2781229:2800786280078628019221137Acidovorax sp. JS42, complete genomehypothetical protein3e-34145
NC_015422:1694363:1705002170500217061381137Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein3e-34145
NC_011992:1318691:1329096132909613302321137Acidovorax ebreus TPSY, complete genomehypothetical protein6e-34144
NC_019973:5601346:5615503561550356166511149Mesorhizobium australicum WSM2073, complete genomeMazG nucleotide pyrophosphohydrolase family protein1e-33144
NC_014923:5666619:5686543568654356876911149Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completeMazG nucleotide pyrophosphohydrolase1e-33144
NC_015675:6228000:6241214624121462423621149Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein1e-33144
NC_015381:2859000:2909384290938429105231140Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-31137
NC_017075:1:6259625974041146Rubrivivax gelatinosus IL144, complete genomehypothetical protein5e-31135