Pre_GI: BLASTP Hits

Some Help

Query: NC_007951:1042291:1049518 Burkholderia xenovorans LB400 chromosome 1, complete sequence

Start: 1049518, End: 1051041, Length: 1524

Host Lineage: Burkholderia xenovorans; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Originally identified as Pseudomonas sp. LB400 that was found in contaminated soil in upstate New York, USA, this organism is now classified in the genus Burkholderia. Polychlorinated biphenyl-degrading bacterium. Member of the genus Burkholderia are versatile organisms that occupy a surprisingly wide range of ecological niches. These bacteria are exploited for biocontrol, bioremediation, and plant growth promotion purposes. Burkholderia xenovorans has been found on fungi, animals, and from human clinical isolates such as from cystic fibrosis (CF) patients. It may be tightly associated with white-rot fungus, as the degadation of lignin by the fungus results in aromatic compounds the bacterium can then degrade. This organism is exceptionally capable of degradation of polychlorinated biphenyls (PCBs), which are environmental pollutants, and thus it may play a role in bioremediation of polluted and toxic sites and is studied as a model bioremediator. PCBs can be utilized as the sole carbon and energy source by this organism. The pathways for degradation of PCBs have been extensively characterized at both the genetic and the molecular level and have become a model system for the bacterial breakdown of these very persistent environmental contaminants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:4167500:4180132418013241815951464Pseudomonas putida KT2440, complete genomehypothetical protein7e-25115
NC_004578:5336773:5381679538167953831031425Pseudomonas syringae pv. tomato str. DC3000, complete genomesite-specific recombinase, phage integrase family1e-1792
NC_010322:5349000:5358502535850253599681467Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein2e-1790.9
NC_015633:2565753:2591438259143825927871350Vibrio anguillarum 775 chromosome chromosome I, complete sequencehypothetical protein8e-1789
NC_009656:6224221:6261451626145162628241374Pseudomonas aeruginosa PA7 chromosome, complete genomesite-specific recombinase, phage integrase family protein2e-1480.9
NC_010322:1817598:1852561185256118539401380Pseudomonas putida GB-1 chromosome, complete genomeintegrase family protein1e-1378.6
NC_020209:4312892:433922743392274339952726Pseudomonas poae RE*1-1-14, complete genomephage integrase family protein2e-0964.3
NC_018080:6048516:608553960855396086111573Pseudomonas aeruginosa DK2 chromosome, complete genomesite-specific recombinase, phage integrase family protein3e-0757