Pre_GI: BLASTP Hits

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Query: NC_007949:9839:20821 Polaromonas sp. JS666 plasmid 1, complete sequence

Start: 20821, End: 22104, Length: 1284

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_020211:1704500:1734374173437417357531380Serratia marcescens WW4, complete genomeTolC family type I secretion outer membrane protein1e-36154
NC_009832:1719149:1749485174948517508641380Serratia proteamaculans 568, complete genometype I secretion outer membrane protein, TolC family3e-34146
NC_015567:1660462:1692777169277716941531377Serratia sp. AS9 chromosome, complete genometype I secretion outer membrane protein, TolC family4e-32139
NC_015566:1659288:1692765169276516941411377Serratia sp. AS12 chromosome, complete genometype I secretion outer membrane protein, TolC family4e-32139
NC_020064:1547524:1575771157577115771471377Serratia marcescens FGI94, complete genometype I secretion outer membrane protein, TolC family4e-32139
NC_012912:2426520:2427879242787924292791401Dickeya zeae Ech1591, complete genometype I secretion outer membrane protein, TolC family1e-22107
NC_014394:3036758:3064392306439230657261335Gallionella capsiferriformans ES-2 chromosome, complete genometype I secretion outer membrane protein, TolC family5e-1789.4
NC_015563:3203012:3203012320301232044871476Delftia sp. Cs1-4 chromosome, complete genometype I secretion outer membrane protein, TolC family6e-1169.3
NC_015856:2146713:2171512217151221728731362Collimonas fungivorans Ter331 chromosome, complete genometype I secretion outer membrane protein, TolC5e-0962.8
NC_013353:3787991:3788825378882537903061482Escherichia coli O103:H2 str. 12009, complete genometransport channel protein TolC9e-0961.6
AP010958:3787991:3788825378882537903061482Escherichia coli O103:H2 str. 12009 DNA, complete genometransport channel protein TolC9e-0961.6
NC_011901:491783:5140955140955154171323Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype I secretion outer membrane protein, TolC1e-0861.6
NC_011750:3683760:3683760368376036852411482Escherichia coli IAI39 chromosome, complete genomeouter membrane channel protein1e-0861.2
NC_010468:694943:7149747149747164551482Escherichia coli ATCC 8739, complete genometype I secretion outer membrane protein, TolC family1e-0861.2
NC_000913:3176000:3176137317613731776181482Escherichia coli K12, complete genomeouter membrane channel precursor protein1e-0861.2
CP002516:693703:7124107124107138911482Escherichia coli KO11, complete genometype I secretion outer membrane protein, TolC family1e-0861.2
NC_010473:3273882:3273882327388232753631482Escherichia coli str. K-12 substr. DH10B, complete genometransport channel1e-0861.2
NC_012759:3063285:3063285306328530647661482Escherichia coli BW2952 chromosome, complete genomeouter membrane channel protein1e-0861.2
NC_012947:708064:7267717267717282521482Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeouter membrane channel protein1e-0861.2
NC_013364:3840000:3840082384008238415631482Escherichia coli O111:H- str. 11128, complete genometransport channel protein TolC1e-0861.2
NC_016822:3485631:3485631348563134871121482Shigella sonnei 53G, complete genomeouter membrane channel protein1e-0861.2
NC_016902:693703:7124107124107138911482Escherichia coli KO11FL chromosome, complete genomeTolC family type I secretion outer membrane protein1e-0861.2
NC_008314:2611873:261187326118732612835963Ralstonia eutropha H16 chromosome 2, complete sequenceouter membrane protein1e-0758.5
NC_004578:5623783:5648897564889756503361440Pseudomonas syringae pv. tomato str. DC3000, complete genomeouter membrane efflux protein TolC, putative3e-0757
NC_016612:627118:6271186271186285661449Klebsiella oxytoca KCTC 1686 chromosome, complete genomeouter membrane channel protein3e-0757
NC_005773:951744:9566839566839580891407Pseudomonas syringae pv. phaseolicola 1448A, complete genomeouter membrane efflux protein3e-0756.6
NC_015422:3366500:3371684337168433730301347Alicycliphilus denitrificans K601 chromosome, complete genometype I secretion outer membrane protein, TolC family3e-0756.6
NC_014311:2781898:2782369278236927837541386Ralstonia solanacearum PSI07 chromosome, complete genometype I secretion outer membrane protein, TolC2e-0654.3