Pre_GI: BLASTP Hits

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Query: NC_007948:3502843:3514834 Polaromonas sp. JS666, complete genome

Start: 3514834, End: 3515838, Length: 1005

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010170:4739925:474591447459144746852939Bordetella petrii, complete genomeputative branched-chain amino acid transport permease7e-30131
NC_014831:2133060:2139824213982421408641041Thermaerobacter marianensis DSM 12885 chromosome, complete genomeamino acid/amide ABC transporter membrane protein 2, HAAT family2e-21103
NC_007908:1108494:1153859115385911548601002Rhodoferax ferrireducens T118, complete genomeinner-membrane translocator3e-21102
NC_009434:3434381:3457774345777434587811008Pseudomonas stutzeri A1501, complete genomebranched-chain amino acid ABC transporter, permease protein3e-21102
NC_015458:3077804:3095936309593630969491014Pusillimonas sp. T7-7 chromosome, complete genomeputative branched-chain amino acid transport permease2e-20100
NC_003047:3202125:321969032196903220682993Sinorhizobium meliloti 1021, complete genomePUTATIVE PERMEASE ABC TRANSPORTER PROTEIN3e-2099.4
NC_015727:1294532:1317921131792113189281008Cupriavidus necator N-1 plasmid BB1p, complete sequenceABC transporter permease8e-1994.7
NC_008752:3217695:3221166322116632224881323Acidovorax avenae subsp. citrulli AAC00-1, complete genomeinner-membrane translocator2e-1893.6
NC_007298:2947200:296968429696842970646963Dechloromonas aromatica RCB, complete genomeinner-membrane translocator4e-1892.4
NC_012988:4075429:4097873409787340996541782Methylobacterium extorquens DM4, complete genomebranched chain amino acid ABC transporter ATPase/permease4e-1789
NC_010172:3712000:3731947373194737337281782Methylobacterium extorquens PA1, complete genomeABC transporter related6e-1788.6
NC_010725:3992948:4015262401526240170431782Methylobacterium populi BJ001, complete genomeABC transporter related7e-1788.2
NC_007336:66000:7065970659716901032Ralstonia eutropha JMP134 megaplasmid, complete sequenceinner-membrane translocator1e-1687.8
NC_011004:4073916:4112488411248841137081221Rhodopseudomonas palustris TIE-1, complete genomeinner-membrane translocator2e-1687
NC_007643:3799425:380586938058693806813945Rhodospirillum rubrum ATCC 11170, complete genomeinner-membrane translocator5e-1685.5
NC_011894:2125474:2124458212445821254771020Methylobacterium nodulans ORS 2060, complete genomeinner-membrane translocator6e-1685.1
NC_010511:637214:6517406517406527531014Methylobacterium sp. 4-46 chromosome, complete genomeinner-membrane translocator1e-1584.3
NC_017506:1100679:112439011243901125346957Marinobacter adhaerens HP15 chromosome, complete genomeinner-membrane translocator3e-1583.2
NC_012658:545840:548918548918549862945Clostridium botulinum Ba4 str. 657 chromosome, complete genomeputative high-affinity branched-chain amino acid ABC transporter permease3e-1582.8
NC_015422:3366500:3389942338994233912761335Alicycliphilus denitrificans K601 chromosome, complete genomeABC transporter integral membrane subunit5e-1582.4
NC_015724:129331:149490149490150476987Cupriavidus necator N-1 plasmid BB2p, complete sequenceinner-membrane translocator5e-1582
NC_007953:504939:515785515785516729945Burkholderia xenovorans LB400 chromosome 3, complete sequenceABC branched chain amino acid family transporter, inner membrane subunit5e-1582
NC_010002:4890192:490904449090444910006963Delftia acidovorans SPH-1, complete genomeinner-membrane translocator1e-1480.9
NC_015563:2656628:265755126575512658513963Delftia sp. Cs1-4 chromosome, complete genomeABC transporter integral membrane protein1e-1480.5
NC_016585:1004000:102149810214981022475978Azospirillum lipoferum 4B plasmid AZO_p1, complete sequencebranched-chain amino acid ABC transporter permease2e-1376.6
NC_009720:464078:4640784640784666692592Xanthobacter autotrophicus Py2, complete genomeABC transporter related6e-1375.1
NC_016147:3023180:304202330420233043000978Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeABC-type branched-chain amino acid transport system1e-1273.9
NC_015499:119200:1449201449201459421023Thermodesulfobium narugense DSM 14796 chromosome, complete genomeABC-type transporter, integral membrane subunit2e-1273.6
NC_015376:3631392:3632854363285436339151062Burkholderia gladioli BSR3 chromosome chromosome 2, completeinner-membrane translocator3e-1272.8
NC_014153:1663597:1675237167523716762711035Thiomonas intermedia K12 chromosome, complete genomeinner-membrane translocator4e-1272.8
NC_015684:1343251:1362993136299313640031011Oligotropha carboxidovorans OM5 chromosome, complete genomeABC transporter permease2e-1170.1
NC_013895:1282566:1293495129349512945141020Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, complete3e-1169.3
NC_014641:20103:346843468435682999Achromobacter xylosoxidans A8 plasmid pA81, complete sequenceinner-membrane translocator 731e-1067.8
NC_020210:2044944:2050274205027420512811008Geobacillus sp. GHH01, complete genomeputative leucine ABC transporter permease3e-1066.2
NC_016147:2820232:282635928263592827195837Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeinner-membrane translocator3e-1066.2
NC_014974:1076565:109235510923551093308954Thermus scotoductus SA-01 chromosome, complete genomemembrane spanning protein5e-1065.5
NC_017249:908500:9424139424139434951083Bradyrhizobium japonicum USDA 6, complete genomeABC transporter permease5e-1065.5
NC_015318:981989:996989996989997915927Hippea maritima DSM 10411 chromosome, complete genomeABC transporter integral membrane subunit5e-1065.5
NC_010551:1462827:1479140147914014803661227Burkholderia ambifaria MC40-6 chromosome 1, complete sequenceinner-membrane translocator8e-1064.7
NC_020908:5047410:5053342505334250544481107Octadecabacter arcticus 238, complete genomeputative branched-chain amino acid transport permease component8e-1064.7
NC_013524:392089:4069004069004088221923Sphaerobacter thermophilus DSM 20745 chromosome 2, complete genomeABC transporter related protein3e-0962.8
NC_010170:3944228:396496539649653965918954Bordetella petrii, complete genomeBranched-chain amino acid transport system, permease component3e-0962.8
NC_004193:701622:719968719968720954987Oceanobacillus iheyensis HTE831, complete genomebranched-chain amino acid ABC transporter permease6e-0962
NC_009445:467682:4995554995555006251071Bradyrhizobium sp. ORS 278 chromosome, complete genomebranched-chain amino acid ABC transporter permease7e-0961.6
NC_017192:1063955:106606210660621067027966Arcobacter sp. L, complete genomebranched-chain amino acid ABC transporter permease component2e-0860.5
NC_008786:4216152:423616342361634237110948Verminephrobacter eiseniae EF01-2, complete genomeinner-membrane translocator5e-0858.9
NC_016633:1898234:1897221189722118982371017Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomebranched-chain amino acid ABC transporter permease7e-0858.5
NC_002937:614000:6191546191546203771224Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completehigh-affinity branched-chain amino acid ABC transporter, permease protein8e-0858.2
NC_008751:2774000:2792703279270327939261224Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomeinner-membrane translocator8e-0858.2
NC_019964:2080444:2098168209816820995891422Halovivax ruber XH-70, complete genomeABC-type branched-chain amino acid transport system, permease component8e-0858.2
NC_004113:1137754:1154071115407111552401170Thermosynechococcus elongatus BP-1, complete genomeABC transporter permease protein1e-0757.8
NC_014830:3438504:3477396347739634784031008Intrasporangium calvum DSM 43043 chromosome, complete genomeinner-membrane translocator1e-0757.4
NC_015224:279037:2836292836292849151287Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,leucine/isoleucine/valine transporter permease subunit3e-0756.2
NC_006569:69939:977659776598703939Silicibacter pomeroyi DSS-3 megaplasmid, complete sequencebranched-chain amino acid ABC transporter, permease protein4e-0755.8
NC_011768:79297:9729197291983641074Desulfatibacillum alkenivorans AK-01, complete genomeinner-membrane translocator8e-0755.1
NC_015948:2421933:2421933242193324230541122Haloarcula hispanica ATCC 33960 chromosome chromosome I, completebranched-chain amino acid ABC transporter permease1e-0654.3
NC_007516:2420264:2429697242969724308451149Synechococcus sp. CC9605, complete genomeputative membrane protein of urea ABC transport system2e-0653.9
NC_013595:5221330:5236791523679152378371047Streptosporangium roseum DSM 43021, complete genomeinner-membrane translocator2e-0653.9
NC_011757:1553500:1558379155837915595001122Methylobacterium chloromethanicum CM4, complete genomeurea ABC transporter, permease protein UrtC2e-0653.5
NC_012988:1817000:1821920182192018230411122Methylobacterium extorquens DM4, complete genomeBranched-chain amino acid ABC transporter permease2e-0653.5
NC_014837:1144500:1166422116642211688902469Pantoea sp. At-9b chromosome, complete genomeABC transporter-like protein2e-0653.5
NC_014844:2638994:2656306265630626575981293Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomeinner-membrane translocator2e-0653.5
NC_011060:1898224:193093419309341931929996Pelodictyon phaeoclathratiforme BU-1, complete genomeinner-membrane translocator5e-0652.4
NC_010676:2658495:2678591267859126797601170Burkholderia phytofirmans PsJN chromosome 2, complete sequenceinner-membrane translocator5e-0652.4
NC_015224:1641819:1663190166319016642661077Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,branched chain amino acid ABC transporter permease7e-0651.6
NC_011001:302500:3147633147633158361074Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative branched-chain amino acid transporter8e-0651.6
NC_012724:3222415:3243959324395932451311173Burkholderia glumae BGR1 chromosome 1, complete genomeInner-membrane translocator8e-0651.6
NC_009778:1717458:1717458171745817185311074Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein9e-0651.6
NC_012997:4621764:4637721463772146388871167Teredinibacter turnerae T7901, complete genomeurea ABC transporter, permease protein UrtC1e-0551.2