Pre_GI: BLASTP Hits

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Query: NC_007946:289425:354713 Escherichia coli UTI89, complete genome

Start: 354713, End: 355318, Length: 606

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (UTI89) is a uropathogenic strain isolated from a woman with uncomplicated cystitis (bladder inflammation) that has been demonstrated to cause cystitis in a murine urinary tract infection model. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:334467:411406411406412011606Escherichia coli 536, complete genomeTetR-family regulatory protein2e-101367
NC_004431:364000:419239419239419844606Escherichia coli CFT073, complete genometranscriptional regulator BetI2e-101367
NC_008563:318993:356305356305356901597Escherichia coli APEC O1, complete genomeregulatory protein BetI2e-101367
NC_011415:351810:368816368816369403588Escherichia coli SE11 chromosome, complete genometranscriptional regulator BetI8e-98355
NC_020063:3690308:369030836903083690895588Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator, TetR family5e-93340
NC_020260:1993344:201212620121262012734609Cronobacter sakazakii Sp291, complete genometranscriptional regulator BetI6e-68256
NC_020211:1621000:163383016338301634417588Serratia marcescens WW4, complete genomeDNA-binding transcriptional repressor7e-59226
NC_014500:3023762:302946130294613030075615Dickeya dadantii 3937 chromosome, complete genomeDNA-binding transcriptional regulatory protein BetI5e-57220
NC_012917:2921932:292193229219322922519588Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, TetR family4e-56217
NC_004547:1970686:199268619926861993273588Erwinia carotovora subsp. atroseptica SCRI1043, complete genometranscriptional regulator BetI4e-56217
NC_014532:988351:994348994348994980633Halomonas elongata DSM 2581, complete genometranscriptional regulator BetI1e-43176
NC_007645:829500:846356846356846952597Hahella chejuensis KCTC 2396, complete genomeTranscriptional regulator4e-35147
NC_017387:1110412:112071311207131121306594Acinetobacter baumannii TCDC-AB0715 chromosome, complete genometranscriptional regulator BetI3e-32137
NC_016584:3040887:304528830452883045887600Desulfosporosinus orientis DSM 765 chromosome, complete genometranscriptional regulator2e-0962.4
NC_015733:3595882:359744735974473598091645Pseudomonas putida S16 chromosome, complete genomeTetR family transcriptional regulator6e-0960.8
NC_014666:8016066:802999880299988030690693Frankia sp. EuI1c chromosome, complete genometranscriptional regulator, TetR family9e-0960.1
NC_019897:1577015:160920016092001609808609Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein3e-0858.5
NC_014364:394899:399697399697400305609Spirochaeta smaragdinae DSM 11293 chromosome, complete genometranscriptional regulator, TetR family3e-0755.1
NC_010814:3673983:368707836870783687647570Geobacter lovleyi SZ, complete genometranscriptional regulator, TetR family4e-0754.7
NC_018691:1322389:132622213262221326935714Alcanivorax dieselolei B5 chromosome, complete genometranscriptional regulator, TetR family protein9e-0650.1