Pre_GI: BLASTP Hits

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Query: NC_007925:3933765:3950567 Rhodopseudomonas palustris BisB18, complete genome

Start: 3950567, End: 3952618, Length: 2052

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011386:3723019:20620622632058Oligotropha carboxidovorans OM5, complete genomehypothetical protein0855
NC_016027:2446806:2463166246316624652772112Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein0653
NC_010125:1538335:1552113155211315542242112Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein0638
NC_011365:1171536:1197201119720111993122112Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein0637
NC_015186:2908387:2910505291050529125502046Acidiphilium multivorum AIU301, complete genomehypothetical protein9e-173607
NC_009719:1972545:1973557197355719755421986Parvibaculum lavamentivorans DS-1 chromosome, complete genomehypothetical protein2e-132473
NC_010943:1332243:1345632134563213475961965Stenotrophomonas maltophilia K279a, complete genomehypothetical protein1e-127457
NC_015556:2265940:2284506228450622864551950Pseudomonas fulva 12-X chromosome, complete genomehypothetical protein1e-127457
NC_008752:725189:7501817501817521691989Acidovorax avenae subsp. citrulli AAC00-1, complete genomehypothetical protein3e-124446
NC_003295:2787371:2804432280443228064832052Ralstonia solanacearum GMI1000, complete genomeHYPOTHETICAL/UNKNOWN PROTEIN4e-123442
NC_007802:3575739:3580699358069935827832085Jannaschia sp. CCS1, complete genomehypothetical protein4e-120432
NC_008577:1455000:1481079148107914830521974Shewanella sp. ANA-3 chromosome 1, complete sequencehypothetical protein3e-120432
NC_015381:2859000:2890870289087028928311962Burkholderia gladioli BSR3 chromosome 1, complete sequencetype IV secretory pathway VirD2 component1e-119431
NC_011992:3752867:3773366377336637753331968Acidovorax ebreus TPSY, complete genomehypothetical protein2e-117423
NC_014910:242845:2601642601642621461983Alicycliphilus denitrificans BC chromosome, complete genomehypothetical protein1e-116421
NC_014500:842493:8679708679708699371968Dickeya dadantii 3937 chromosome, complete genomeVirD2 components relaxase2e-116420
NC_010170:4800000:4824978482497848269391962Bordetella petrii, complete genomeprobable conjugal transfer protein VirD22e-110400
NC_014006:344331:3584373584373605002064Sphingobium japonicum UT26S chromosome 1, complete genometype IV secretory pathway VirD2 component7e-104378
NC_012791:2233098:2233098223309822348101713Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein8e-93342
NC_016445:89500:971099710997930822Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein4e-87322
NC_012668:3037345:305165530516553052539885Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein5e-87322
NC_006526:1976779:1998005199800519992641260Zymomonas mobilis subsp. mobilis ZM4, complete genomeVirD2 components relaxase3e-76286
NC_012982:711122:7261567261567280961941Hirschia baltica ATCC 49814, complete genomehypothetical protein3e-69263
NC_009720:4406991:4436904443690444386431740Xanthobacter autotrophicus Py2, complete genomehypothetical protein2e-68261
NC_016027:2512297:2516500251650025182421743Gluconacetobacter xylinus NBRC 3288, complete genomehypothetical protein1e-67258
NC_014834:959986:9609979609979627361740Rhodopseudomonas palustris DX-1 chromosome, complete genometype IV secretory pathway VirD2 component2e-67257
NC_004463:18497:3932939329412031875Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein2e-67257
NC_014414:2540189:2544170254417025461071938Parvularcula bermudensis HTCC2503 chromosome, complete genomehypothetical protein1e-66255
NC_010125:381711:4023154023154040541740Gluconacetobacter diazotrophicus PAl 5, complete genomehypothetical protein2e-66254
NC_007643:955362:9709319709319727421812Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein1e-65251
NC_008686:1472899:1472899147289914746531755Paracoccus denitrificans PD1222 chromosome 1, complete sequencehypothetical protein9e-66251
NC_011365:1135750:1157246115724611590001755Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomehypothetical protein1e-61238
NC_011059:670345:6729736729736749041932Prosthecochloris aestuarii DSM 271, complete genomehypothetical protein2e-60234
NC_014100:2782000:2797176279717627988821707Caulobacter segnis ATCC 21756 chromosome, complete genomehypothetical protein6e-59229
NC_010338:2443765:2446096244609624478171722Caulobacter sp. K31, complete genomehypothetical protein3e-58226
NC_010410:3606826:367497536749753675871897Acinetobacter baumannii AYE, complete genome3e-43177
NC_017249:18493:3932339323404981176Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein9e-36152
NC_011662:2320100:235038623503862351012627Thauera sp. MZ1T, complete genome7e-34145
NC_011365:1865687:186676018667601867389630Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome2e-31137
NC_013422:1755875:1774266177426617757471482Halothiobacillus neapolitanus c2, complete genomeType IV secretory pathway VirD2 pilin (relaxase)-like protein7e-30132
NC_015850:1242010:1255351125535112570961746Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein6e-28126
NC_011206:1264639:1279646127964612811961551Acidithiobacillus ferrooxidans ATCC 53993, complete genomeType IV secretory pathway VirD2 pilin (relaxase)-like protein2e-25118
NC_017249:3119000:312451831245183125219702Bradyrhizobium japonicum USDA 6, complete genometransposase5e-23110
NC_017249:3119000:312406831240683124460393Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-1689
NC_017249:3119000:312375331237533123947195Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-1480.9
NC_015385:1875671:1897372189737218985651194Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein1e-0758.9
NC_015386:107000:1203881203881215841197Treponema succinifaciens DSM 2489 plasmid pTRESU01, completehypothetical protein3e-0757.4