Pre_GI: BLASTP Hits

Some Help

Query: NC_007912:3403101:3414540 Saccharophagus degradans 2-40, complete genome

Start: 3414540, End: 3415103, Length: 564

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007645:6096345:610776961077696108335567Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein PilN1e-48192
NC_009439:574437:582005582005582577573Pseudomonas mendocina ymp, complete genomefimbrial assembly family protein1e-42172
NC_015740:636667:645255645255645827573Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetype 4 fimbrial biogenesis protein PilN2e-39161
NC_009434:608765:618462618462619034573Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilN3e-39160
NC_015572:293665:308840308840309412573Methylomonas methanica MC09 chromosome, complete genomeFimbrial assembly family protein3e-31134
NC_013722:2784000:280868728086872809445759Xanthomonas albilineans, complete genomeprobable type iv pilus assembly protein piln3e-30131
NC_014315:352395:362597362597363172576Nitrosococcus watsoni C-113 chromosome, complete genomefimbrial assembly family protein2e-28125
NC_007298:219783:227822227822228391570Dechloromonas aromatica RCB, complete genomeFimbrial assembly5e-26117
NC_008344:1899317:191691919169191917530612Nitrosomonas eutropha C91, complete genomeFimbrial assembly family protein8e-26116
NC_016616:1233555:124143312414331242002570Dechlorosoma suillum PS chromosome, complete genomeTfp pilus assembly protein PilN1e-25116
NC_007484:266594:274250274250274825576Nitrosococcus oceani ATCC 19707, complete genomeType 4 fimbrial biogenesis protein PilN7e-25113
NC_015731:2950874:295413129541312954721591Nitrosomonas sp. Is79A3 chromosome, complete genomeFimbrial assembly family protein1e-24112
NC_015563:1172745:117975811797581180369612Delftia sp. Cs1-4 chromosome, complete genomeFimbrial assembly family protein1e-22105
NC_010002:6189733:620393362039336204544612Delftia acidovorans SPH-1, complete genomeFimbrial assembly family protein4e-22104
NC_008782:752686:770281770281770892612Acidovorax sp. JS42, complete genomeFimbrial assembly family protein1e-21102
NC_011992:717107:728941728941729552612Acidovorax ebreus TPSY, complete genomeFimbrial assembly family protein1e-2099.4
NC_008825:3298506:331194933119493312593645Methylibium petroleiphilum PM1, complete genomefimbrial assembly protein1e-1892.8
NC_008786:18688:309703097031593624Verminephrobacter eiseniae EF01-2, complete genomeFimbrial assembly family protein4e-1890.9
NC_008781:708811:716487716487716978492Polaromonas naphthalenivorans CJ2, complete genomeFimbrial assembly family protein2e-1582
NC_015711:8909256:892060689206068921283678Myxococcus fulvus HW-1 chromosome, complete genometype IV pilus biogenesis protein PilN5e-1373.9
NC_007498:2475781:248897724889772489555579Pelobacter carbinolicus DSM 2380, complete genomeTfp pilus assembly protein, PilN-like7e-1373.6
NC_008095:7139056:715036971503697151046678Myxococcus xanthus DK 1622, complete genometype IV pilus biogenesis protein PilN2e-1168.6
NC_011979:3341099:335459933545993355171573Geobacter sp. FRC-32, complete genomeFimbrial assembly family protein7e-0960.5
NC_009483:2086021:209887420988742099449576Geobacter uraniireducens Rf4 chromosome, complete genomefimbrial assembly family protein3e-0858.2
NC_008609:1027838:103816510381651038746582Pelobacter propionicus DSM 2379, complete genomeFimbrial assembly family protein5e-0754.3