Pre_GI: BLASTP Hits

Some Help

Query: NC_007912:2768363:2774041 Saccharophagus degradans 2-40, complete genome

Start: 2774041, End: 2774430, Length: 390

Host Lineage: Saccharophagus degradans; Saccharophagus; Alteromonadaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain is a marine gamma-proteobacterium that was isolated from decaying Spartina alterniflora, a salt marsh cord grass, in the Chesapeake Bay, USA. Saccharophagus degradans 2-40 has been used to produce ethanol from plant material and may be useful for the production bioethanol. Bacterium able to degrade complex carbohydrates. Saccharophagus degradans is capable of degrading insoluble complex carbohydrates through the collective action of enzyme complexes found on its cell surfaces, utilizing the degradation products as a carbon source. This organism may be useful in bioremediation. The degradative enzymes this organism produces are typically exoenzymes that are collected and organized into large surface complexes termed cellulosomes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021150:3505234:350945135094513509756306Azotobacter vinelandii CA6, complete genomeantisigma-factor antagonist STAS domain protein4e-22103
NC_012560:3505235:350945235094523509757306Azotobacter vinelandii DJ, complete genomeantisigma-factor antagonist STAS domain protein4e-22103
NC_007645:3227098:324000332400033240320318Hahella chejuensis KCTC 2396, complete genomeAnti-anti-sigma regulatory factor (antagonist of anti-sigma factor)2e-1994.4
NC_002947:4931476:495443949544394954744306Pseudomonas putida KT2440, complete genomeanti-sigma F factor antagonist, putative2e-1787.4
NC_010501:4080937:410377341037734104078306Pseudomonas putida W619, complete genomeanti-sigma-factor antagonist5e-1683.2
NC_009654:3849774:388386738838673884169303Marinomonas sp. MWYL1, complete genomeanti-sigma-factor antagonist2e-1374.3
NC_007298:778723:804899804899805204306Dechloromonas aromatica RCB, complete genomeSulfate transporter/antisigma-factor antagonist STAS1e-1272
NC_004460:1237129:125657912565791256878300Vibrio vulnificus CMCP6 chromosome II, complete sequenceAnti-anti-sigma regulatory factor2e-0961.6
NC_005140:1820970:184089418408941841193300Vibrio vulnificus YJ016 chromosome II, complete sequenceanti-anti-sigma regulatory factor2e-0961.6
NC_010995:1459831:147735614773561478003648Cellvibrio japonicus Ueda107, complete genomehypothetical protein3e-0650.8