Pre_GI: BLASTP Hits

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Query: NC_007778:3470661:3484682 Rhodopseudomonas palustris HaA2, complete genome

Start: 3484682, End: 3485917, Length: 1236

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:506611:5236505236505248611212Enterobacter cloacae EcWSU1 chromosome, complete genometype-1 restriction enzyme specificity protein8e-111400
NC_016838:85487:9616296162973581197Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS1,Restriction modification system DNA specificity domain protein1e-105383
NC_012491:743883:7529087529087541431236Brevibacillus brevis NBRC 100599, complete genomeputative type I restriction modification system specificity protein1e-76287
NC_010278:315941:3251443251443263131170Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,putative type I restriction enzyme specificity protein3e-57223
NC_011601:4856717:4865866486586648670921227Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype I restriction-modification enzyme S subunit6e-49195
NC_015565:2408669:2416907241690724181391233Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completerestriction modification system DNA specificity domain-containing protein3e-48192
NC_016012:665171:6749916749916761721182Candidatus Arthromitus sp. SFB-rat-Yit, complete genometype I restriction modification DNA specificity domain-containing protein1e-44181
NC_005823:1105524:1122397112239711235781182Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130type I restriction enzyme7e-39161
NC_015761:299386:3115343115343127541221Salmonella bongori NCTC 12419, complete genometype I restriction-modification methylase1e-38160
NC_010939:321492:3299713299713311371167Actinobacillus pleuropneumoniae serovar 7 str. AP76, completeputative Type I restriction enzyme EcoR124II specificity protein5e-38159
NC_004342:3164500:3178062317806231792971236Leptospira interrogans serovar Lai str. 56601 chromosome I,Type I restriction enzyme EcoprrI specificity protein1e-35151
NC_017378:1518529:1518529151852915196801152Helicobacter pylori Puno120 chromosome, complete genomerestriction modification system DNA specificity subunit1e-35150
NC_010645:558974:5689445689445701641221Bordetella avium 197N, complete genometype i restriction enzyme EcoR124II specificity protein2e-31137
NC_010003:1126800:1142463114246311437521290Petrotoga mobilis SJ95, complete genomerestriction modification system DNA specificity domain2e-28126
NC_019908:463281:4689914689914700131023Brachyspira pilosicoli P43/6/78 chromosome, complete genomerestriction endonuclease type I S subunit2e-28126
NC_015144:47783:8410884108853311224Weeksella virosa DSM 16922 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-26119
NC_014815:6616500:6671211667121166724521242Micromonospora sp. L5 chromosome, complete genomerestriction modification system DNA specificity domain protein5e-25115
NC_009053:313779:3204273204273215211095Actinobacillus pleuropneumoniae L20, complete genomeputative Type I restriction enzyme EcoR124II specificity protein1e-24114
NC_017033:678321:6856856856856869081224Frateuria aurantia DSM 6220 chromosome, complete genomerestriction endonuclease S subunit3e-24113
NC_012691:2476223:2493223249322324944881266Tolumonas auensis DSM 9187, complete genomerestriction modification system DNA specificity domain protein4e-24112
NC_014655:1396672:1403761140376114049331173Leadbetterella byssophila DSM 17132 chromosome, complete genomerestriction modification system DNA specificity domain4e-23109
NC_011831:2213306:2212048221204822133191272Chloroflexus aggregans DSM 9485, complete genomerestriction modification system DNA specificity domain protein1e-22107
NC_014314:212579:2201042201042213391236Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completerestriction modification system DNA specificity domain-containing protein5e-22105
NC_018607:1505908:1518405151840515196521248Brachyspira pilosicoli B2904 chromosome, complete genometype I restriction-modification enzyme S subunit2e-20100
NC_010120:788000:8002548002548014711218Neisseria meningitidis 053442, complete genometype I restriction enzyme8e-2098.6
NC_014330:169862:1879201879201891551236Brachyspira pilosicoli 95/1000 chromosome, complete genomeputative type I restriction endonuclease S subunit HsdS4e-1892.8
NC_014034:1036652:1048875104887510505001626Rhodobacter capsulatus SB1003 chromosome, complete genometype I restriction-modification system RcaSBIP subunit S8e-1891.7
NC_008786:2729635:2739305273930527405851281Verminephrobacter eiseniae EF01-2, complete genomerestriction modification system DNA specificity domain2e-1790.5
NC_014638:183115:2105542105542117651212Bifidobacterium bifidum PRL2010 chromosome, complete genometype I restriction-modification system specificity determinant2e-1790.5
NC_000912:107273:1116101116101126171008Mycoplasma pneumoniae M129, complete genomehypothetical protein4e-1789.7
NC_012669:549500:5588755588755601011227Beutenbergia cavernae DSM 12333, complete genomerestriction modification system DNA specificity domain protein4e-1789.4
NC_020450:875757:8959428959428971441203Lactococcus lactis subsp. lactis IO-1 DNA, complete genometype I restriction enzyme, S subunit5e-1789
NC_016612:2009927:2027292202729220288781587Klebsiella oxytoca KCTC 1686 chromosome, complete genometype I restriction-modification system RcaSBIP subunit S7e-1788.6
NC_015320:1690047:1699124169912417003861263Archaeoglobus veneficus SNP6 chromosome, complete genomerestriction modification system DNA specificity domain-containing protein1e-1688.2
NC_015437:767572:7790997790997804301332Selenomonas sputigena ATCC 35185 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-1687.4
NC_005090:1082213:109251910925191093085567Wolinella succinogenes DSM 1740, complete genomePROBABLE TYPE I RESTRICTION ENZYME S PROTEIN2e-1584
NC_009656:6224221:6241571624157162432141644Pseudomonas aeruginosa PA7 chromosome, complete genometype I restriction-modification system subunit S2e-1377.4
NC_010175:2488000:2494129249412924954451317Chloroflexus aurantiacus J-10-fl, complete genomerestriction modification system DNA specificity domain4e-1376.3
NC_013949:939695:9490009490009502861287Helicobacter mustelae 12198 chromosome, complete genometype I restriction-modification system S protein6e-1375.9
NC_019964:2816990:2836848283684828381791332Halovivax ruber XH-70, complete genomerestriction endonuclease S subunit7e-1375.5
NC_014363:1902868:191157019115701912100531Olsenella uli DSM 7084 chromosome, complete genomerestriction modification system DNA specificity domain protein2e-1273.9
NC_019902:1863162:1874009187400918753281320Thioalkalivibrio nitratireducens DSM 14787, complete genomeType I restriction-modification system, specificity subunit S9e-1271.6
NC_010617:558954:5701515701515713471197Kocuria rhizophila DC2201, complete genometype I restriction enzyme S protein2e-1170.9
NC_015500:484984:5002385002385014611224Treponema brennaborense DSM 12168 chromosome, complete genomerestriction modification system DNA specificity domain protein4e-1169.7
NC_008699:1132790:116861411686141169099486Nocardioides sp. JS614, complete genomerestriction modification system DNA specificity domain1e-1068.2
NC_016023:1959255:1968791196879119699301140Bacillus coagulans 36D1 chromosome, complete genomehypothetical protein3e-1066.6
NC_018721:943801:9501419501419514091269Psychroflexus torquis ATCC 700755 chromosome, complete genometype I restriction-modification system, specificity subunit HdsS2e-0963.9
NC_008340:2034810:2045005204500520462641260Alkalilimnicola ehrlichei MLHE-1, complete genomerestriction modification system DNA specificity domain3e-0963.5
NC_014727:995480:1008566100856610097111146Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,restriction endonuclease s subunits-like protein4e-0963.2
NC_014752:1530000:153707615370761537693618Neisseria lactamica ST-640, complete genomerestriction modification system DNA specificity domain4e-0859.7
NC_006510:2910000:2931510293151029328261317Geobacillus kaustophilus HTA426, complete genometype I restriction-modification system specificity determinant3e-0756.6
NC_015138:5342473:5353136535313653544401305Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completerestriction modification system DNA specificity domain-containing protein4e-0756.2
NC_019978:1066000:1070757107075710721091353Halobacteroides halobius DSM 5150, complete genomerestriction endonuclease S subunit1e-0654.7
NC_015578:465814:4757814757814771931413Treponema primitia ZAS-2 chromosome, complete genomedna methylase-type I restriction-modification system2e-0654.3