Pre_GI: BLASTP Hits

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Query: NC_007492:4310828:4327212 Pseudomonas fluorescens PfO-1, complete genome

Start: 4327212, End: 4327865, Length: 654

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009439:1297851:132234613223461323020675Pseudomonas mendocina ymp, complete genometwo component heavy metal response transcriptional regulator7e-0753.9
NC_016831:1950650:195362119536211954301681Salmonella enterica subsp. enterica serovar Gallinarum/pullorumresponse regulator1e-0653.5
NC_004557:363628:385961385961386656696Clostridium tetani E88, complete genometwo-component response regulator3e-0651.6