Pre_GI: BLASTP Hits

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Query: NC_007492:3801237:3802978 Pseudomonas fluorescens PfO-1, complete genome

Start: 3802978, End: 3804582, Length: 1605

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004578:3921199:3926984392698439285851602Pseudomonas syringae pv. tomato str. DC3000, complete genomemethyl-accepting chemotaxis protein0668
NC_016002:1326500:1335790133579013375951806Pseudogulbenkiania sp. NH8B, complete genomemethyl-accepting chemotaxis sensory transducer4e-42172
NC_010511:6711836:6731553673155367336942142Methylobacterium sp. 4-46 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer7e-28125
NC_017059:3163319:3178068317806831798191752Rhodospirillum photometricum DSM 122, complete genomehypothetical protein9e-2099
NC_011894:6793497:6794496679449667962021707Methylobacterium nodulans ORS 2060, complete genomemethyl-accepting chemotaxis sensory transducer3e-1377.4
NC_011146:896000:9060919060919085592469Geobacter bemidjiensis Bem, complete genomemethyl-accepting chemotaxis sensory transducer2e-1171.2
NC_009483:3544333:3566182356618235677831602Geobacter uraniireducens Rf4 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer2e-1067.8
NC_008609:142471:1513531513531529751623Pelobacter propionicus DSM 2379, complete genomemethyl-accepting chemotaxis sensory transducer2e-0964.3
NC_010814:903199:9183209183209199421623Geobacter lovleyi SZ, complete genomemethyl-accepting chemotaxis sensory transducer7e-0859.3
NC_014483:3235968:3255513325551332572521740Paenibacillus polymyxa E681 chromosome, complete genomeMethyl-accepting chemotaxis protein1e-0758.5
NC_014973:2693672:2693672269367226953211650Geobacter sp. M18 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer1e-0758.2
NC_009697:419443:4317064317064337602055Clostridium botulinum A str. ATCC 19397 chromosome, completemethyl-accepting chemotaxis protein5e-0756.6
NC_002939:805794:8057948057948074431650Geobacter sulfurreducens PCA, complete genomemethyl-accepting chemotaxis protein9e-0755.5
NC_004193:375416:5665415665415683761836Oceanobacillus iheyensis HTE831, complete genomemethyl-accepting chemotaxis protein1e-0655.5
NC_014973:3151701:3170594317059431722281635Geobacter sp. M18 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer1e-0655.1
NC_012030:345837:370871370871371746876Halorubrum lacusprofundi ATCC 49239 plasmid pHLAC01, complete1e-0655.1
NC_014622:3525017:3545878354587835476411764Paenibacillus polymyxa SC2 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer2e-0654.7
NC_013946:879199:8960218960218983392319Meiothermus ruber DSM 1279 chromosome, complete genomemethyl-accepting chemotaxis sensory transducer2e-0654.3
NC_014253:795869:8177868177868199032118Methanohalobium evestigatum Z-7303 chromosome, complete genomeCache sensor-containing methyl-accepting chemotaxis sensory transducer2e-0654.3
NC_000917:940088:9509479509479534512505Archaeoglobus fulgidus DSM 4304, complete genomemethyl-accepting chemotaxis protein (tlpC-2)6e-0652.8
NC_002937:1915787:1923475192347519255622088Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completemethyl-accepting chemotaxis protein8e-0652.4
NC_008751:2988235:3002296300229630043832088Desulfovibrio vulgaris subsp. vulgaris DP4, complete genomemethyl-accepting chemotaxis sensory transducer9e-0652.4
NC_010814:903199:9090419090419106631623Geobacter lovleyi SZ, complete genomemethyl-accepting chemotaxis sensory transducer1e-0552.4