Pre_GI: BLASTP Hits

Some Help

Query: NC_007492:3655545:3674110 Pseudomonas fluorescens PfO-1, complete genome

Start: 3674110, End: 3675048, Length: 939

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018691:3525430:353716735371673538147981Alcanivorax dieselolei B5 chromosome, complete genomeSigma factor regulatory protein, FecR/PupR family5e-60231
NC_011958:1121387:114404611440461145020975Rhodobacter sphaeroides KD131 chromosome 2, complete genomeFecR protein2e-1790.1
NC_009040:43791:623866238663360975Rhodobacter sphaeroides ATCC 17029 plasmid pRSPH01, completeputative FecR2e-1789.7
NC_013421:1954915:197058119705811971534954Pectobacterium wasabiae WPP163, complete genomeanti-FecI sigma factor, FecR1e-1584
NC_010510:339879:345373345373346371999Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completeanti-FecI sigma factor, FecR2e-1583.2
NC_010322:768849:785508785508786506999Pseudomonas putida GB-1 chromosome, complete genomeanti-FecI sigma factor FecR4e-1582.4
NC_016112:1735044:175536217553621756315954Methylomicrobium alcaliphilum chromosome, complete genomeAnti-FecI sigma factor, FecR2e-1480.1
NC_009937:5033152:503543550354355036382948Azorhizobium caulinodans ORS 571, complete genomeputative iron siderophore sensor protein3e-1479.3
NC_015556:2265940:230352123035212304444924Pseudomonas fulva 12-X chromosome, complete genomeanti-FecI sigma factor, FecR9e-1477.8
NC_008027:2648560:265110926511092652029921Pseudomonas entomophila L48, complete genomeFecR-like transmembrane sensor5e-1272
NC_010995:2123909:2130175213017521311971023Cellvibrio japonicus Ueda107, complete genomeprobable transmembrane sensor2e-1170.1
NC_015594:1210736:121465212146521215626975Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeanti-FecI sigma factor FecR2e-1067
NC_015563:4093650:4097302409730240983301029Delftia sp. Cs1-4 chromosome, complete genomeanti-FecI sigma factor FecR6e-1065.1
NC_014664:1360524:137378513737851374765981Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeanti-FecI sigma factor, FecR4e-0962.4
NC_015593:2841856:288455028845502885536987Sphingobium chlorophenolicum L-1 chromosome chromosome 1, completeanti-FecI sigma factor FecR6e-0962
NC_018691:1293449:131480613148061315771966Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor FecR7e-0961.6
NC_008686:1592073:161110316111031612077975Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative FecR2e-0860.5
NC_002516:1474000:147546414754641476306843Pseudomonas aeruginosa PAO1, complete genomeprobable transmembrane sensor2e-0860.5
NC_016830:3697173:371480137148013715781981Pseudomonas fluorescens F113 chromosome, complete genomeFe2+-dicitrate sensor membrane protein2e-0860.5
NC_014640:5047201:5066881506688150678941014Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein3e-0859.3
NC_014100:2782000:280326228032622804257996Caulobacter segnis ATCC 21756 chromosome, complete genomeanti-FecI sigma factor FecR5e-0858.9
NC_014228:3591758:3599750359975036007931044Xenorhabdus nematophila ATCC 19061, complete genomeProtein fecR7e-0858.2
NC_012962:4591295:459839645983964599361966Photorhabdus asymbiotica, complete genomeprotein fecr7e-0858.2
NC_012560:2546000:254697025469702547803834Azotobacter vinelandii DJ, complete genomeAnti-sigma factor, FecR family1e-0757.8
NC_021150:2546000:254698225469822547815834Azotobacter vinelandii CA6, complete genomeAnti-sigma factor, FecR family1e-0757.8
NC_018691:359695:359695359695360609915Alcanivorax dieselolei B5 chromosome, complete genomeAnti-FecI sigma factor, FecR3e-0755.8
NC_015572:427732:455162455162456127966Methylomonas methanica MC09 chromosome, complete genomeanti-FecI sigma factor FecR6e-0755.1
NC_016822:4889656:489301448930144893967954Shigella sonnei 53G, complete genomefec operon regulator FecR8e-0754.7
NC_014640:2693060:269635326963532697321969Achromobacter xylosoxidans A8 chromosome, complete genomeFecR family protein1e-0654.3
NC_012759:4433500:445352244535224454475954Escherichia coli BW2952 chromosome, complete genomefec operon regulator FecR1e-0653.9
AC_000091:4501430:452144445214444522397954Escherichia coli W3110 DNA, complete genometransmembrane signal transducer for ferric citrate transport1e-0653.9
NC_010473:4596500:461659546165954617548954Escherichia coli str. K-12 substr. DH10B, complete genomeKpLE2 phage-like element; transmembrane signal transducer for ferric citrate transport1e-0653.9
NC_013132:35061:5502555025561551131Chitinophaga pinensis DSM 2588, complete genomeanti-FecI sigma factor, FecR2e-0653.5
NC_010338:2136193:2139478213947821405121035Caulobacter sp. K31, complete genomeanti-FecI sigma factor, FecR3e-0652.8
NC_004547:1174650:120816712081671209129963Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeiron(III) dicitrate sensor protein3e-0652.8
NC_015976:3118804:311880431188043119787984Sphingobium sp. SYK-6, complete genomeputative anti-sigma factor4e-0652.4
NC_015497:4683741:470812247081224709078957Glaciecola agarilytica 4H-3-7+YE-5 chromosome, complete genomeanti-FecI sigma factor, FecR7e-0651.6