Pre_GI: BLASTP Hits

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Query: NC_007492:3384077:3393605 Pseudomonas fluorescens PfO-1, complete genome

Start: 3393605, End: 3394372, Length: 768

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014973:4503054:450635145063514507124774Geobacter sp. M18 chromosome, complete genomebeta-lactamase domain-containing protein2e-96351
NC_014100:2782000:278723127872312788139909Caulobacter segnis ATCC 21756 chromosome, complete genomebeta-lactamase-like protein6e-81300
NC_015663:1356982:138721113872111387990780Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein3e-79295
NC_009092:3783000:379141737914173792193777Shewanella loihica PV-4, complete genomehypothetical protein3e-78291
NC_017195:517344:524881524881525645765Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completeYddR1e-75282
NC_000964:521975:553254553254554018765Bacillus subtilis subsp. subtilis str. 168, complete genomehypothetical protein3e-74278
NC_016047:637778:658697658697659461765Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completehypothetical protein8e-74276
NC_015690:3941113:395599139559913956749759Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYddR23e-73275
NC_009725:496443:503986503986504756771Bacillus amyloliquefaciens FZB42, complete genomeYddR5e-73274
NC_020410:495184:502715502715503476762Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeputative metal-dependent hydrolase2e-72272
NC_014479:509919:535896535896536657762Bacillus subtilis subsp. spizizenii str. W23 chromosome, completeputative beta-lactamase3e-72271
NC_017195:517344:551586551586552347762Bacillus subtilis subsp. subtilis str. RO-NN-1 chromosome, completemetallo-beta-lactamase superfamily, putative9e-71266
NC_009524:861500:863452863452864366915Psychrobacter sp. PRwf-1 chromosome, complete genomebeta-lactamase fold-like Zn-dependent hydrolase1e-69263
NC_016047:2658000:266318426631842663945762Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, completemetallo-beta-lactamase superfamily protein1e-69263
NC_021184:2975975:299189829918982992677780Desulfotomaculum gibsoniae DSM 7213, complete genomeputative Zn-dependent hydrolase of beta-lactamase fold protein1e-65249
NC_019960:1658657:173244117324411733205765Prevotella dentalis DSM 3688 chromosome 1, complete sequenceputative Zn-dependent hydrolase of beta-lactamase fold protein1e-57223
NC_016641:2894899:292486529248652925617753Paenibacillus terrae HPL-003 chromosome, complete genomebeta-lactamase9e-51200
NC_014483:1146682:116347411634741164226753Paenibacillus polymyxa E681 chromosome, complete genomePredicted Zn-dependent hydrolase of the beta-lactamase fold2e-48192
NC_007645:6647500:664930066493006650133834Hahella chejuensis KCTC 2396, complete genomepredicted Zn-dependent Hydrolase of the beta-lactamase fold1e-25117
NC_014761:74500:881508815088800651Oceanithermus profundus DSM 14977 chromosome, complete genomezn-dependent hydrolase of the beta-lactamase fold protein6e-22104
NC_013131:10413240:104264271042642710427206780Catenulispora acidiphila DSM 44928, complete genomeZn-dependent hydrolase of the beta-lactamase fold-like protein5e-0961.6
NC_013743:3193355:319335531933553194242888Haloterrigena turkmenica DSM 5511, complete genomehypothetical protein1e-0757.4
NC_017030:9028412:9029885902988590309701086Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein8e-0754.3
NC_018080:3055358:305871730587173059604888Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-0653.1