Pre_GI: BLASTP Hits

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Query: NC_007492:2203220:2221079 Pseudomonas fluorescens PfO-1, complete genome

Start: 2221079, End: 2222308, Length: 1230

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014618:690056:6919586919586931841227Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein0680
NC_012962:484899:4848994848994861251227Photorhabdus asymbiotica, complete genomehypothetical protein0639
NC_020418:116500:1520921520921533181227Morganella morganii subsp. morganii KT, complete genomeProtein RtcB2e-180631
NC_007912:335500:3375273375273387231197Saccharophagus degradans 2-40, complete genomeputative transcriptional regulator, Fis family2e-121436
NC_011662:2402408:2405883240588324070791197Thauera sp. MZ1T, complete genomeprotein of unknown function UPF00275e-121434
NC_007333:1559321:1574764157476415759511188Thermobifida fusca YX, complete genomehypothetical protein2e-106386
NC_009142:3943829:3959521395952139607111191Saccharopolyspora erythraea NRRL 2338, complete genomehypothetical protein8e-104377
NC_011884:315839:3355893355893367701182Cyanothece sp. PCC 7425, complete genomeprotein of unknown function UPF00271e-98360
NC_016802:2035723:2055123205512320562831161Corynebacterium diphtheriae HC02 chromosome, complete genomehypothetical protein2e-90333
NC_016788:2054739:2072827207282720739871161Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein2e-90333
NC_016788:2007721:2025809202580920269691161Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein2e-90333
NC_016510:1749967:1758174175817417595651392Flavobacterium columnare ATCC 49512 chromosome, complete genomehypothetical protein5e-49195
NC_018605:558391:5725855725855737331149Cardinium endosymbiont cPer1 of Encarsia pergandiella, completeRNA-splicing ligase RtcB2e-46186
NC_012490:2660089:266308426630842663854771Rhodococcus erythropolis PR4, complete genomehypothetical protein4e-46186
NC_020054:4161049:4195038419503841965761539Fibrella aestuarina BUZ 2 drat genomeprotein of unknown function UPF00279e-45181
NC_005213:63752:7215872158735911434Nanoarchaeum equitans Kin4-M, complete genomehypothetical protein3e-43176
NC_012490:2660089:266008926600892660613525Rhodococcus erythropolis PR4, complete genomehypothetical protein2e-40167
NC_013790:583474:6063026063026077501449Methanobrevibacter ruminantium M1 chromosome, complete genomehypothetical protein5e-40165
NC_015185:1114180:1128671112867111298491179Desulfurobacterium thermolithotrophum DSM 11699 chromosome,hypothetical protein4e-39162
NC_016609:8251438:8265852826585282673151464Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein2e-38160
NC_019791:638500:6530926530926545341443Caldisphaera lagunensis DSM 15908 chromosome, complete genomehypothetical protein5e-38159
NC_013642:1425795:1440425144042514418491425Thermotoga naphthophila RKU-10, complete genomeprotein of unknown function UPF00276e-37155
NC_002754:824180:8241808241808256281449Sulfolobus solfataricus P2, complete genomehypothetical protein5e-37155
NC_017243:2813733:2816188281618828173661179Brachyspira intermedia PWS/A chromosome, complete genomehypothetical protein5e-37155
NC_017275:1189162:1212729121272912141771449Sulfolobus islandicus HVE10/4 chromosome, complete genomearchaeal RNA splicing ligase4e-37155
NC_011766:1106739:1131237113123711326851449Desulfurococcus kamchatkensis 1221n chromosome, complete genomeprotein of unknown function UPF00274e-37155
NC_013156:573037:5812785812785827201443Methanocaldococcus fervens AG86, complete genomeprotein of unknown function UPF00271e-36154
NC_010483:1467616:1480614148061414820381425Thermotoga sp. RQ2, complete genomeprotein of unknown function UPF00271e-36154
NC_014209:787535:8030118030118045191509Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,protein of unknown function UPF00271e-36154
NC_014964:1608575:1613647161364716150111365Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completehypothetical protein9e-37154
NC_010321:1616362:1621434162143416227981365Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completehypothetical protein9e-37154
NC_013921:755800:7754147754147769221509Thermoanaerobacter italicus Ab9 chromosome, complete genomeprotein of unknown function UPF00278e-37154
NC_007775:2546833:2556041255604125574711431Synechococcus sp. JA-3-3Ab, complete genomehypothetical protein7e-36151
NC_009718:731670:7437447437447451621419Fervidobacterium nodosum Rt17-B1, complete genomehypothetical protein9e-36151
NC_009486:1403175:1416173141617314175971425Thermotoga petrophila RKU-1 chromosome, complete genomehypothetical protein1e-35151
NC_014160:748743:7589827589827604301449Thermosphaera aggregans DSM 11486 chromosome, complete genomehypothetical protein4e-35149
NC_015320:828972:8438148438148452561443Archaeoglobus veneficus SNP6 chromosome, complete genomehypothetical protein8e-35148
NC_007181:1094422:1121472112147211229201449Sulfolobus acidocaldarius DSM 639, complete genomeuniversally conserved protein1e-34147
NC_015437:2354429:2369932236993223711731242Selenomonas sputigena ATCC 35185 chromosome, complete genomeprotein of unknown function UPF00271e-34147
NC_014721:434501:4412494412494426041356Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein4e-34145
NC_014828:1335154:1373891137389113751111221Ethanoligenens harbinense YUAN-3 chromosome, complete genomeprotein of unknown function UPF00271e-33144
NC_013926:920279:9280259280259294791455Aciduliprofundum boonei T469 chromosome, complete genomeprotein of unknown function UPF00272e-32140
NC_017161:927290:9305039305039319451443Hydrogenobacter thermophilus TK-6 chromosome, complete genomehypothetical protein6e-32138
NC_013799:927300:9305139305139319551443Hydrogenobacter thermophilus TK-6, complete genomehypothetical protein6e-32138
NC_008698:235688:2374232374232388711449Thermofilum pendens Hrk 5, complete genomeprotein of unknown function UPF00279e-32138
NC_013940:137713:1476071476071490551449Deferribacter desulfuricans SSM1 megaplasmid pDF308, completehypothetical protein3e-30133
NC_005085:1498000:1503319150331915047521434Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein7e-30131
NC_013158:1085937:1107305110730511087531449Halorhabdus utahensis DSM 12940, complete genomeprotein of unknown function UPF00272e-29130
NC_005835:1345790:1348331134833113497611431Thermus thermophilus HB27, complete genomertcB protein2e-28127
NC_008095:1428665:1451139145113914522961158Myxococcus xanthus DK 1622, complete genomehypothetical protein1e-27124
NC_016048:456732:472363472363473229867Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein3e-25116
NC_015275:654959:6679246679246690301107Clostridium lentocellum DSM 5427 chromosome, complete genomerelease factor H-coupled RctB family protein4e-24112
NC_019902:1863162:1877988187798818794181431Thioalkalivibrio nitratireducens DSM 14787, complete genomeProtein RtcB8e-24111
NC_000909:597692:6079836079836108892907Methanocaldococcus jannaschii DSM 2661, complete genomehypothetical protein6e-23108
NC_013887:1462918:1468541146854114714502910Methanocaldococcus sp. FS406-22 chromosome, complete genomeprotein of unknown function UPF00272e-22107
NC_013741:687546:6893446893446922292886Archaeoglobus profundus DSM 5631, complete genomeprotein of unknown function UPF00271e-21104
NC_014623:2475598:2490273249027324916971425Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein3e-21103
NC_003551:1678882:1683574168357416865402967Methanopyrus kandleri AV19, complete genomeUncharacterized conserved protein, contains an intein2e-20100
NC_013517:825100:8430138430138440861074Sebaldella termitidis ATCC 33386, complete genomerelease factor H-coupled RctB family protein8e-1788.6
NC_009380:2310000:2312211231221123133981188Salinispora tropica CNB-440 chromosome, complete genomehypothetical protein2e-1377.4
NC_016048:456732:473251473251473565315Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein5e-0859.3