Pre_GI: BLASTP Hits

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Query: NC_007492:2035761:2037685 Pseudomonas fluorescens PfO-1, complete genome

Start: 2037685, End: 2038638, Length: 954

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from agricultural loam (sand, clay, and organic matter) soil in 1988 by Compeau et al. and is well adapted to soil environments. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005773:3851433:386830138683013869278978Pseudomonas syringae pv. phaseolicola 1448A, complete genomecytochrome c oxidase, cbb3-type, subunit III3e-123441
NC_021150:1965264:198571919857191986639921Azotobacter vinelandii CA6, complete genomecytochrome c oxidase, cbb3-type, subunit III7e-123440
NC_012560:1965251:198570619857061986626921Azotobacter vinelandii DJ, complete genomecytochrome c oxidase, cbb3-type, subunit III7e-123440
NC_007005:4062311:408018940801894081166978Pseudomonas syringae pv. syringae B728a, complete genomeCytochrome c oxidase cbb3-type, subunit III9e-116416
NC_009092:2282437:229998822999882300959972Shewanella loihica PV-4, complete genomecytochrome c oxidase, cbb3-type, subunit III9e-71267
NC_009052:2512373:254939025493902550358969Shewanella baltica OS155, complete genomecytochrome c oxidase, cbb3-type, subunit III3e-70265
NC_007298:778723:785864785864786763900Dechloromonas aromatica RCB, complete genomeCytochrome c oxidase cbb3-type, subunit III3e-69262
NC_016745:2229271:223221722322172233194978Oceanimonas sp. GK1 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit III6e-69261
NC_008702:1432952:146286814628681463761894Azoarcus sp. BH72, complete genomeprobable cytochrome c oxidase, cbb3-type,subunit III2e-67256
NC_014541:2122788:213793621379362138925990Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit III4e-65248
NC_009379:435404:448269448269449207939Polynucleobacter sp. QLW-P1DMWA-1, complete genomecytochrome c oxidase, cbb3-type, subunit III3e-63242
NC_011992:1038985:104442310444231045337915Acidovorax ebreus TPSY, complete genomecytochrome c oxidase, cbb3-type, subunit III5e-58224
NC_015422:1163752:117270711727071173621915Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit III6e-57221
NC_008782:1136732:114216711421671143081915Acidovorax sp. JS42, complete genomecytochrome c oxidase, cbb3-type, subunit III2e-55216
NC_014910:3458475:347072634707263471646921Alicycliphilus denitrificans BC chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit iii5e-55214
NC_007404:359764:359764359764360684921Thiobacillus denitrificans ATCC 25259, complete genomeCytochrome c oxidase cbb3-type, subunit III8e-38157
NC_012848:320883:340868340868341731864Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,cytochrome c oxidase, cbb3-type, subunit III6e-35148
NC_013422:2004478:201355920135592014536978Halothiobacillus neapolitanus c2, complete genomecytochrome c oxidase, cbb3-type, subunit III7e-31134
NC_009465:29735:421214212143023903Candidatus Vesicomyosocius okutanii HA, complete genomecbb3-type cytochrome c oxidase subunit III1e-24114
NC_008095:6877388:688870668887066889236531Myxococcus xanthus DK 1622, complete genomecytochrome c oxidase, cbb3-type, subunit III1e-1790.9
NC_020126:7896447:791765079176507918201552Myxococcus stipitatus DSM 14675, complete genomecbb3-type cytochrome c oxidase subunit III2e-1790.1
NC_010118:133256:145985145985146773789Candidatus Sulcia muelleri GWSS, complete genomeputative cytochrome c oxidase subunit ccoP2e-1273.6
NC_009714:1329573:133104613310461331960915Campylobacter hominis ATCC BAA-381, complete genomecb-type cytochrome c oxidase subunit III3e-1066.2
NC_015186:36502:4108941089428161728Acidiphilium multivorum AIU301, complete genomegluconate 2-dehydrogenase5e-0962.4
NC_012660:2045398:2065341206534120666301290Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cytochrome C oxidase (monoheme and diheme subunits)9e-0961.2
NC_011146:1429836:143105614310561431547492Geobacter bemidjiensis Bem, complete genomecytochrome c class I4e-0858.9
NC_015671:1540860:155473015547301555515786Cellvibrio gilvus ATCC 13127 chromosome, complete genomecytochrome c class I5e-0858.9
NC_009483:2201986:221624922162492216713465Geobacter uraniireducens Rf4 chromosome, complete genomehypothetical protein5e-0858.5
NC_014151:2312000:231862023186202319405786Cellulomonas flavigena DSM 20109 chromosome, complete genomecytochrome c class I1e-0654.3
NC_019940:1309359:131050713105071311253747Thioflavicoccus mobilis 8321 chromosome, complete genomecytochrome c5531e-0653.9
NC_003888:2305901:231273923127392313548810Streptomyces coelicolor A3(2), complete genomecytochrome C heme-binding subunit2e-0653.5
NC_010617:1428902:143634614363461437137792Kocuria rhizophila DC2201, complete genomemenaquinol-cytochrome c reductase cytochrome c subunit2e-0653.1