Pre_GI: BLASTP Hits

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Query: NC_007356:51080:82995 Dehalococcoides sp. CBDB1, complete genome

Start: 82995, End: 83891, Length: 897

Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria

General Information: This strain was isolated from an enriched chlorobenzene-dechlorinatng mixed culture from anoxic river sediment. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002936:1395432:1406081140608114071151035Dehalococcoides ethenogenes 195, complete genomesensory box sensor histidine kinase2e-68259
NC_013552:1187299:1215292121529212163531062Dehalococcoides sp. VS, complete genomesensory box sensor histidine kinase1e-46187
NC_013552:68003:8478484784858751092Dehalococcoides sp. VS, complete genomesensor histidine kinase2e-26119
NC_014314:1485500:1504752150475215065751824Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completemulti-sensor signal transduction histidine kinase6e-26118
NC_014314:238043:2589652589652603861422Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completeputative PAS/PAC sensor protein2e-23110
NC_009455:273519:304200304200304961762Dehalococcoides sp. BAV1 chromosome, complete genomehistidine kinase4e-1995.5
NC_007356:1221500:1235417123541712365861170Dehalococcoides sp. CBDB1, complete genomesensor histidine kinase7e-1891.3
NC_015856:2146713:2150921215092121538752955Collimonas fungivorans Ter331 chromosome, complete genomePAS/PAC sensor signal transduction histidine kinase1e-0964.3
NC_007498:357484:3768073768073805263720Pelobacter carbinolicus DSM 2380, complete genometwo component sensor histidine kinase1e-0963.9
NC_015574:1474967:1492207149220714946212415Methanobacterium sp. SWAN-1 chromosome, complete genomesignal transduction histidine kinase6e-0961.6
NC_009253:829913:8340778340778356391563Desulfotomaculum reducens MI-1 chromosome, complete genomePAS/PAC sensor-containing diguanylate cyclase1e-0860.5
NC_015572:65597:6559765597697574161Methylomonas methanica MC09 chromosome, complete genomePAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase5e-0858.5
NC_013744:300000:3029693029693056202652Haloterrigena turkmenica DSM 5511 plasmid pHTUR01, completePAS/PAC sensor signal transduction histidine kinase1e-0757.4
NC_014394:2228470:2238632223863222426634032Gallionella capsiferriformans ES-2 chromosome, complete genomemulti-sensor signal transduction histidine kinase6e-0755.1
NC_014654:221707:2395522395522410001449Halanaerobium sp. 'sapolanicus' chromosome, complete genomediguanylate cyclase and metal dependent phosphohydrolase9e-0754.7
NC_002939:2617037:2634831263483126378783048Geobacter sulfurreducens PCA, complete genomesensory box histidine kinase/response regulator1e-0654.3
NC_013959:826868:8672508672508700332784Sideroxydans lithotrophicus ES-1 chromosome, complete genomediguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)1e-0653.9
NC_013890:808791:8152388152388190263789Dehalococcoides sp. GT chromosome, complete genomePAS/PAC sensor hybrid histidine kinase2e-0653.5
NC_014253:933261:9412849412849429961713Methanohalobium evestigatum Z-7303 chromosome, complete genomesignal transduction histidine kinase2e-0653.1
NC_019977:1245894:1251178125117812536942517Methanomethylovorans hollandica DSM 15978, complete genomePAS domain S-box3e-0652.8
NC_010609:1077453:1076405107640510774601056Lactobacillus reuteri JCM 1112, complete genometwo component sensor histidine kinase4e-0652.4
NC_003552:1008475:1024642102464210268912250Methanosarcina acetivorans C2A, complete genomesensory transduction histidine kinase6e-0651.6
NC_014394:2111985:2128742212874221310242283Gallionella capsiferriformans ES-2 chromosome, complete genomemulti-sensor signal transduction histidine kinase6e-0651.6