Pre_GI: BLASTP Hits

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Query: NC_007348:2519447:2536454 Ralstonia eutropha JMP134 chromosome 2, complete sequence

Start: 2536454, End: 2536879, Length: 426

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:1645879:166296516629651663333369Pseudomonas fluorescens F113 chromosome, complete genomeMannose-6-phosphate isomerase1e-36151
NC_013850:3340882:336841233684123368774363Klebsiella variicola At-22 chromosome, complete genomeCupin 2 conserved barrel domain protein1e-35148
NC_012483:3000619:300137030013703001738369Acidobacterium capsulatum ATCC 51196, complete genomecupin domain protein2e-34144
NC_020260:2725201:273290427329042733266363Cronobacter sakazakii Sp291, complete genomecupin domain-containing protein4e-34143
NC_009725:496443:534212534212534574363Bacillus amyloliquefaciens FZB42, complete genomehypothetical protein1e-33141
NC_020410:495184:518315518315518680366Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeMannose-6-phosphate isomerase2e-33140
NC_019842:484933:525939525939526304366Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein5e-33139
NC_003047:74986:942149421494570357Sinorhizobium meliloti 1021, complete genomehypothetical protein4e-25113
NC_016048:2907702:294119729411972941556360Oscillibacter valericigenes Sjm18-20, complete genomehypothetical protein6e-2199.4
NC_013131:7437831:744677574467757447176402Catenulispora acidiphila DSM 44928, complete genomecyclic nucleotide-binding protein5e-2199.4
NC_011283:1178500:118314011831401183502363Klebsiella pneumoniae 342 chromosome, complete genomecupin domain-containing protein6e-2096.3
NC_020911:2998000:3014086301408630151441059Octadecabacter antarcticus 307, complete genomeputative triosephosphate isomerase (TIM)3e-1580.5
NC_015638:877233:885926885926886291366Lacinutrix sp. 5H-3-7-4 chromosome, complete genomeCupin 2 barrel domain-containing protein7e-1475.9
NC_017191:425000:440722440722441063342Bacillus amyloliquefaciens XH7 chromosome, complete genomehypothetical protein4e-1166.6
NC_017190:424000:439425439425439766342Bacillus amyloliquefaciens LL3 chromosome, complete genomehypothetical protein4e-1166.6
NC_017188:419000:434692434692435033342Bacillus amyloliquefaciens TA208 chromosome, complete genomehypothetical protein4e-1166.6
NC_014551:442135:457288457288457629342Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein4e-1166.6
NC_014834:959986:963852963852964271420Rhodopseudomonas palustris DX-1 chromosome, complete genomecupin5e-1063.2