Pre_GI: BLASTP Hits

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Query: NC_007347:3612918:3612918 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 3612918, End: 3614429, Length: 1512

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003296:1665569:1687543168754316890751533Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completespermidine synthase0664
NC_014623:2216825:2217088221708822185841497Stigmatella aurantiaca DW4/3-1 chromosome, complete genomespermidine synthase3e-136485
NC_003888:4031299:4033456403345640351201665Streptomyces coelicolor A3(2), complete genomespermidine synthase9e-62238
NC_011296:229494:247791247791248690900Thermodesulfovibrio yellowstonii DSM 11347, complete genomespermidine synthase 14e-35149
NC_008818:357993:372529372529373446918Hyperthermus butylicus DSM 5456, complete genomeSpermidine synthase2e-32140
NC_009440:2151638:215313821531382154049912Metallosphaera sedula DSM 5348 chromosome, complete genomespermine synthase1e-31137
NC_011766:275673:282493282493283353861Desulfurococcus kamchatkensis 1221n chromosome, complete genomeSpermine synthase8e-25115
NC_014471:1303634:130363413036341304473840Ignisphaera aggregans DSM 17230 chromosome, complete genomespermidine synthase ;spermine synthase1e-24114
NC_006177:12383:274532745328316864Symbiobacterium thermophilum IAM 14863, complete genomespermidine synthase2e-23110
NC_009253:529494:529494529494530327834Desulfotomaculum reducens MI-1 chromosome, complete genomespermidine synthase6e-23109
NC_018870:1506918:151887515188751519699825Thermacetogenium phaeum DSM 12270 chromosome, complete genomespermidine synthase SpeE6e-23108
NC_010321:1177238:119323511932351194068834Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completespermidine synthase5e-22106
NC_010320:1585974:159970415997041600537834Thermoanaerobacter sp. X514 chromosome, complete genomespermidine synthase5e-22106
NC_014964:1169925:118542611854261186259834Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completespermidine synthase5e-22106
NC_014538:1311500:131384513138451314678834Thermoanaerobacter sp. X513 chromosome, complete genomespermidine synthase5e-22106
NC_018691:4619245:461924546192454620105861Alcanivorax dieselolei B5 chromosome, complete genomeSpermidine synthase7e-22105
NC_015275:1573916:157709115770911577948858Clostridium lentocellum DSM 5427 chromosome, complete genomespermidine synthase1e-21104
NC_009922:411434:436670436670437524855Alkaliphilus oremlandii OhILAs, complete genomespermidine synthase5e-21102
NC_000918:35564:394963949640338843Aquifex aeolicus VF5, complete genomespermidine synthase7e-21102
NC_012726:1292671:129728412972841298189906Sulfolobus islandicus M.16.4 chromosome, complete genomespermine synthase1e-20101
NC_015321:4142843:4158271415827141595541284Fluviicola taffensis DSM 16823 chromosome, complete genomeSpermidine synthase1e-20101
NC_019903:134169:149442149442150296855Desulfitobacterium dichloroeliminans LMG P-21439 chromosome,spermidine synthase3e-20100
NC_009091:1598044:160227616022761603127852Prochlorococcus marinus str. MIT 9301, complete genomeputative spermidine synthase2e-20100
NC_011297:1224749:122978412297841230641858Dictyoglomus thermophilum H-6-12, complete genomespermidine synthase2e-20100
NC_016627:4159406:416155441615544162399846Clostridium clariflavum DSM 19732 chromosome, complete genomespermidine synthase9e-2098.6
NC_006510:1731939:176590917659091766784876Geobacillus kaustophilus HTA426, complete genomespermidine synthase(putrescine aminopropyltransferase)2e-1997.8
NC_010943:4476654:447873544787354479586852Stenotrophomonas maltophilia K279a, complete genomeputative spermidine synthase3e-1997.1
NC_013520:1559000:157462715746271575466840Veillonella parvula DSM 2008, complete genomespermidine synthase3e-1996.7
NC_015474:644552:649171649171650013843Pyrococcus sp. NA2 chromosome, complete genomespermidine synthase4e-1996.7
NC_011071:4235830:424013842401384240989852Stenotrophomonas maltophilia R551-3, complete genomespermidine synthase4e-1996.7
NC_015947:4196800:420114542011454201999855Burkholderia sp. JV3 chromosome, complete genomespermidine synthase5e-1996.3
NC_016818:3986570:400572340057234006598876Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completespermidine synthase1e-1895.1
NC_009482:2109270:212568221256822126530849Synechococcus sp. RCC307 chromosome, complete genomespermidine synthase2e-1894.4
NC_009718:1411793:143073414307341431621888Fervidobacterium nodosum Rt17-B1, complete genomespermidine synthase2e-1894.4
NC_015680:1475917:147724814772481478084837Pyrococcus yayanosii CH1 chromosome, complete genomespermidine synthase7e-1892.4
NC_000868:196015:200547200547201386840Pyrococcus abyssi GE5, complete genomespermidine synthase8e-1892.4
NC_005070:2308363:232536723253672326209843Synechococcus sp. WH 8102, complete genomespermidine synthase2e-1790.9
NC_007516:2383097:240232824023282403170843Synechococcus sp. CC9605, complete genomespermidine synthase3e-1790.1
NC_008820:2595500:260922926092292610089861Prochlorococcus marinus str. MIT 9303, complete genomeputative spermidine synthase6e-1789.4
NC_020134:1941523:196014819601481960993846Clostridium stercorarium subsp. stercorarium DSM 8532, completespermidine synthase SpeE6e-1789.4
NC_007645:6500059:654291165429116543774864Hahella chejuensis KCTC 2396, complete genomespermidine synthase3e-1687.4
NC_014376:386650:408491408491409348858Clostridium saccharolyticum WM1 chromosome, complete genomespermidine synthase1e-1584.7
NC_003413:128228:132382132382133227846Pyrococcus furiosus DSM 3638, complete genomespermidine synthase7e-1582.4
NC_013926:289511:306685306685307500816Aciduliprofundum boonei T469 chromosome, complete genomespermidine synthase1e-1481.6
NC_014541:643604:658587658587659447861Ferrimonas balearica DSM 9799 chromosome, complete genomespermidine synthase1e-1481.3
NC_020410:3547345:356540435654043566234831Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completespermidine synthase; polyamine metabolism2e-1480.5
NC_019842:3594409:360652036065203607350831Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,spermidine synthase2e-1480.5
NC_009725:3559257:357136735713673572197831Bacillus amyloliquefaciens FZB42, complete genomeSpeE2e-1480.5
NC_002570:3911153:393271939327193933546828Bacillus halodurans C-125, complete genomespermidine synthase4e-1480.1
NC_017098:986428:1029931102993110323452415Spirochaeta africana DSM 8902 chromosome, complete genomespermidine synthase7e-1479
NC_014328:3120145:312228331222833123155873Clostridium ljungdahlii ATCC 49587 chromosome, complete genomespermidine synthase9e-1479
NC_020244:3681236:369174336917433692573831Bacillus subtilis XF-1, complete genomespermidine synthase9e-1479
NC_010184:5120359:514030451403045141131828Bacillus weihenstephanensis KBAB4, complete genomespermidine synthase4e-1376.6
NC_015682:205900:220536220536221360825Thermodesulfobacterium sp. OPB45 chromosome, complete genomeSpermidine synthase6e-1375.9
NC_017267:3612682:3614450361445036159491500Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completehypothetical protein9e-1272
NC_006834:1602994:1626805162680516283311527Xanthomonas oryzae pv. oryzae KACC10331, complete genomeputative integral membrane protein1e-0965.5
NC_000961:172610:186485186485187327843Pyrococcus horikoshii OT3, complete genomespermidine synthase1e-0965.1
NC_010688:1192410:1249928124992812514271500Xanthomonas campestris pv. campestris, complete genomespermidine synthase-like enzyme1e-0862
NC_007973:3240866:324086632408663241840975Ralstonia metallidurans CH34 chromosome 1, complete sequenceSpermine synthase6e-0859.3
NC_008340:362000:380472380472381179708Alkalilimnicola ehrlichei MLHE-1, complete genomeSpermine synthase3e-0757.4
NC_013194:69634:8249982499848172319Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeSpermidine synthase-like protein8e-0755.8