Pre_GI: BLASTP Hits

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Query: NC_007347:3204637:3234859 Ralstonia eutropha JMP134 chromosome 1, complete sequence

Start: 3234859, End: 3235485, Length: 627

Host Lineage: Cupriavidus pinatubonensis; Cupriavidus; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This organism is found in both soil and water and has great potential for use in bioremediation as it is capable of degrading a large list of pollutants including chlorinated aromatic compounds. The bacterium can utilize hydrogen, carbon dioxide, as well as organic compounds for growth and is a model organism for hydrogen oxidation as it can grow on hydrogen as the sole energy source. It was originally isolated due to its ability to degrade the herbicide 2,4-dichlorophenoxyacetic acid, which is due to the degradative functions being encoded on a plasmid (pJP4). Metabolically versatile bacterium. Cupriavidus necator also known as Ralstonia eutropha is a soil bacterium with diverse metabolic abilities. Strains of this organism are resistant to high levels of copper or are able to degrade chloroaromatic compounds such as halobenzoates and nitrophenols making them useful for bioremediation.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011001:63986:693316933169948618Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative transporter-LysE family3e-48191
NC_014540:1835493:185317018531701853796627Burkholderia sp. CCGE1003 chromosome 2, complete sequencelysine exporter protein LysE/YggA6e-48190
NC_010552:58294:636696366964286618Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)1e-47189
NC_010515:1428664:144540714454071446024618Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)2e-47189
NC_007511:3512100:352625035262503526864615Burkholderia sp. 383 chromosome 2, complete sequenceLysine exporter family protein (LYSE/YGGA)2e-47188
NC_008543:2871747:287634728763472876964618Burkholderia cenocepacia HI2424 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)3e-46184
NC_008061:2368517:239002123900212390638618Burkholderia cenocepacia AU 1054 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)3e-46184
NC_009665:1831674:184720818472081847801594Shewanella baltica OS185 chromosome, complete genomelysine exporter protein LysE/YggA6e-41167
NC_014532:2298628:229862822986282299227600Halomonas elongata DSM 2581, complete genomehypothetical protein2e-36152
NC_011769:247202:262238262238262888651Desulfovibrio vulgaris str. 'Miyazaki F', complete genomeLysine exporter protein (LYSE/YGGA)4e-36151
NC_009255:2044291:206944520694452070068624Burkholderia vietnamiensis G4 chromosome 2, complete sequencelysine exporter protein LysE/YggA3e-32137
NC_015424:748785:772587772587773183597Aeromonas veronii B565 chromosome, complete genomehypothetical protein2e-28125
NC_007643:4294818:430960843096084310132525Rhodospirillum rubrum ATCC 11170, complete genomehypothetical protein6e-28124
NC_009348:3819271:384406838440683844664597Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein7e-28123
NC_014364:894373:897103897103897699597Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)1e-27122
NC_009348:3819271:384336238433623843952591Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein1e-27122
NC_018643:857911:887828887828888418591Alpha proteobacterium HIMB5 chromosome, complete genomeLysE type translocator3e-27121
NC_008686:1383891:140035314003531400946594Paracoccus denitrificans PD1222 chromosome 1, complete sequenceLysine exporter protein (LYSE/YGGA)7e-25114
NC_005773:5310339:532627353262735326893621Pseudomonas syringae pv. phaseolicola 1448A, complete genometransporter, LysE family5e-24110
NC_012917:4328463:433043543304354331037603Pectobacterium carotovorum subsp. carotovorum PC1, complete genomeLysine exporter protein (LYSE/YGGA)7e-24110
NC_016002:1326500:135045813504581351036579Pseudogulbenkiania sp. NH8B, complete genomelysine exporter protein LysE/YggA1e-22106
NC_015424:748785:773381773381773899519Aeromonas veronii B565 chromosome, complete genomeLysine exporter protein3e-1995.1
NC_004547:667988:689713689713690303591Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein5e-1684.3
NC_011283:2836000:286756828675682868155588Klebsiella pneumoniae 342 chromosome, complete genometranslocator protein, LysE family2e-1582.8
NC_010552:1212000:123158812315881232193606Burkholderia ambifaria MC40-6 chromosome 2, complete sequenceLysine exporter protein (LYSE/YGGA)4e-1581.3
NC_013850:2846069:285750528575052858092588Klebsiella variicola At-22 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)4e-1581.3
NC_014624:1369642:137157213715721372153582Eubacterium limosum KIST612 chromosome, complete genomehypothetical protein1e-1480.1
NC_020541:2850831:285227328522732852869597Rhodanobacter sp. 2APBS1, complete genomeputative threonine efflux protein4e-1374.7
NC_009255:2044291:206483920648392065417579Burkholderia vietnamiensis G4 chromosome 2, complete sequenceputative transmembrane protein2e-1272.8
NC_006322:567987:584818584818585396579Bacillus licheniformis ATCC 14580, complete genomeLysE5e-1167.8
NC_006270:568171:585028585028585606579Bacillus licheniformis ATCC 14580, complete genomeLysine exporter protein5e-1167.8
NC_007963:3225306:323184032318403232460621Chromohalobacter salexigens DSM 3043, complete genomeLysine exporter protein (LYSE/YGGA)1e-1066.2
NC_014623:7963238:798199979819997982655657Stigmatella aurantiaca DW4/3-1 chromosome, complete genomelysine exporter family protein9e-1063.5
NC_012660:4669500:468801746880174688625609Pseudomonas fluorescens SBW25 chromosome, complete genomeputative amino acid efflux protein5e-0961.2
NC_015690:2553837:256160425616042562179576Paenibacillus mucilaginosus KNP414 chromosome, complete genomelysine exporter protein LysE/YggA5e-0960.8
NC_016935:3103430:311113131111313111706576Paenibacillus mucilaginosus 3016 chromosome, complete genomelysine exporter protein LysE/YggA1e-0859.7
NC_019842:3921424:392142439214243922128705Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,hypothetical protein4e-0858.2
NC_020126:2216926:222263522226352223243609Myxococcus stipitatus DSM 14675, complete genomelysine Exporter protein LysE/YggA4e-0858.2
NC_013592:3618248:363092036309203631549630Dickeya dadantii Ech586, complete genomeLysine exporter protein (LYSE/YGGA)5e-0857.8
NC_020244:4020315:402328040232804023831552Bacillus subtilis XF-1, complete genomelysine exporter protein8e-0857
NC_012880:1127997:113352811335281134226699Dickeya dadantii Ech703, complete genomeLysine exporter protein (LYSE/YGGA)2e-0756.2
NC_020410:3868573:387097138709713871549579Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completeLysine exporter protein1e-0756.2
NC_002947:3404000:341220134122013412821621Pseudomonas putida KT2440, complete genometransporter, LysE family2e-0652.8
NC_020064:1409596:141547114154711416103633Serratia marcescens FGI94, complete genomeputative threonine efflux protein2e-0652.4
NC_014166:455378:468772468772469398627Arcobacter nitrofigilis DSM 7299 chromosome, complete genomelysine exporter protein2e-0652
NC_009654:3316458:333297633329763333587612Marinomonas sp. MWYL1, complete genomelysine exporter protein LysE/YggA3e-0652
NC_015947:223184:231035231035231670636Burkholderia sp. JV3 chromosome, complete genomelysine exporter protein LysE/YggA3e-0652
NC_014541:3927500:394089639408963941504609Ferrimonas balearica DSM 9799 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)3e-0651.6
NC_005966:159232:174698174698175324627Acinetobacter sp. ADP1, complete genomehomoserine/homoserine lactone efflux protein5e-0651.2
NC_004603:1464000:146416614641661464825660Vibrio parahaemolyticus RIMD 2210633 chromosome I, completeputative homoserine/homoserine lactone efflux protein5e-0651.2
NC_013166:1341575:134576013457601346383624Kangiella koreensis DSM 16069, complete genomeLysine exporter protein (LYSE/YGGA)5e-0651.2
NC_020210:2969862:297081429708142971440627Geobacillus sp. GHH01, complete genomelysine exporter protein6e-0650.8
NC_003295:856775:858719858719859351633Ralstonia solanacearum GMI1000, complete genomePROBABLE TRANSMEMBRANE PROTEIN6e-0650.8
NC_017078:179848:181927181927182550624Selenomonas ruminantium subsp. lactilytica TAM6421 plasmid pSRC1,putative lysine exporter protein9e-0650.4
NC_019940:389979:401378401378401986609Thioflavicoccus mobilis 8321 chromosome, complete genomethreonine efflux protein1e-0550.1