Pre_GI: BLASTP Hits

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Query: NC_007333:430000:441839 Thermobifida fusca YX, complete genome

Start: 441839, End: 442399, Length: 561

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014211:439611:447438447438447983546Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 plasmidflavoprotein6e-62236
NC_013510:2432879:243956224395622440116555Thermomonospora curvata DSM 43183, complete genomeflavoprotein2e-56218
NC_009953:3224412:323307432330743233649576Salinispora arenicola CNS-205 chromosome, complete genomeflavoprotein6e-41166
NC_015434:1313979:132840213284021328971570Verrucosispora maris AB-18-032 chromosome, complete genomeflavoprotein3e-40164
NC_018750:6588206:660981066098106610337528Streptomyces venezuelae ATCC 10712, complete genomePhosphopantothenoylcysteine decarboxylase5e-35147
NC_021177:3867439:388059338805933881138546Streptomyces fulvissimus DSM 40593, complete genomeFlavoprotein4e-33140
NC_013929:5431954:543396354339635434508546Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-32139
NC_014666:8488567:849485384948538495404552Frankia sp. EuI1c chromosome, complete genomeflavoprotein2e-32138
NC_017093:1411532:141373414137341414318585Actinoplanes missouriensis 431, complete genomeputative flavoprotein5e-31134
NC_013510:747042:757273757273757773501Thermomonospora curvata DSM 43183, complete genomeflavoprotein3e-26117
NC_021177:4258102:426661342666134267185573Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein5e-25114
NC_015957:1070500:108142510814251081988564Streptomyces violaceusniger Tu 4113 chromosome, complete genomeflavoprotein2e-21102
NC_016582:5393568:540134354013435401906564Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein8e-2199.8
NC_013929:2375613:243821524382152438769555Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein6e-1787
NC_017186:6539181:655216065521606552717558Amycolatopsis mediterranei S699 chromosome, complete genomeflavoprotein4e-1477.8
NC_014318:6539137:655211665521166552673558Amycolatopsis mediterranei U32 chromosome, complete genomeflavoprotein4e-1477.8
NC_013729:3573000:358366435836643584200537Kribbella flavida DSM 17836, complete genomeflavoprotein2e-1272
NC_014666:1601972:161028416102841610862579Frankia sp. EuI1c chromosome, complete genomeflavoprotein7e-0857