Pre_GI: BLASTP Hits

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Query: NC_007333:39579:47324 Thermobifida fusca YX, complete genome

Start: 47324, End: 49162, Length: 1839

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014210:5409324:5409324540932454111951872Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,glycoside hydrolase 15-related protein1e-157556
NC_015711:2008578:2025955202595520277781824Myxococcus fulvus HW-1 chromosome, complete genomeglucosyl hydrolase family protein1e-84314
NC_009380:725870:7439927439927457911800Salinispora tropica CNB-440 chromosome, complete genomeglycoside hydrolase 15-like protein1e-83311
NC_008536:2717891:2721733272173327235501818Solibacter usitatus Ellin6076, complete genomeglycoside hydrolase 15-related protein2e-82307
NC_014815:3790050:3790050379005037918971848Micromonospora sp. L5 chromosome, complete genomeglycoside hydrolase 15-related protein2e-82306
NC_007333:1559321:1559321155932115611171797Thermobifida fusca YX, complete genomehypothetical protein2e-81303
NC_007508:4765751:4778597477859747803961800Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeputative glycosyl hydrolase2e-80300
NC_003888:7706226:7707771770777177096721902Streptomyces coelicolor A3(2), complete genomehypothetical protein7e-80298
NC_011027:858565:8630718630718657462676Chlorobaculum parvum NCIB 8327, complete genomeglycoside hydrolase 15-related7e-79295
NC_008095:7614000:7626507762650776283511845Myxococcus xanthus DK 1622, complete genomeglycosyl hydrolase, family 159e-78291
NC_007492:2035761:2056931205693120587601830Pseudomonas fluorescens PfO-1, complete genomeGlycoside hydrolase 15-like2e-77290
NC_008278:5855401:5865398586539858672511854Frankia alni ACN14a, complete genomeConserved hypothetical protein; putative Glycosyl hydrolase family1e-76287
NC_006361:3615322:3617618361761836194591842Nocardia farcinica IFM 10152, complete genomeputative glycosyl hydrolase7e-76285
NC_019974:2421422:2447041244704124489271887Natronococcus occultus SP4, complete genomeglycosyl hydrolase, glucoamylase5e-70266
NC_018750:6192970:6194207619420761965102304Streptomyces venezuelae ATCC 10712, complete genomeGlucoamylase6e-69262
NC_008541:2037793:2047213204721320490301818Arthrobacter sp. FB24 chromosome 1, complete sequenceglycoside hydrolase 15-related protein1e-68261
NC_014830:1871135:1900029190002919018641836Intrasporangium calvum DSM 43043 chromosome, complete genomeglycoside hydrolase 15-related protein6e-67255
NC_015711:2201225:2215679221567922174721794Myxococcus fulvus HW-1 chromosome, complete genomeglucosyl hydrolase family protein4e-64246
NC_016626:1592781:1615489161548916172701782Burkholderia sp. YI23 plasmid byi_1p, complete sequenceglycoside hydrolase1e-61237
NC_002754:2505750:2508253250825325100071755Sulfolobus solfataricus P2, complete genomehypothetical protein2e-57224
NC_008697:202000:2063572063572081531797Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceglycoside hydrolase 15-related2e-55217
NC_017249:263873:2676752676752691351461Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein5e-54213
NC_007508:1324000:1345318134531813471231806Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomeglycosyl hydrolase2e-53210
NC_018581:3646489:3662516366251636645402025Gordonia sp. KTR9 chromosome, complete genomeGlucoamylase-related glycosyl hydrolase2e-53210
NC_016010:1247008:1272721127272112745261806Xanthomonas axonopodis pv. citrumelo F1 chromosome, completeglycosyl hydrolase1e-52207
NC_009142:2692693:2698815269881527006371823Saccharopolyspora erythraea NRRL 2338, complete genomeglycoside hydrolase 15-related2e-51204
NC_007404:974461:9771099771099788601752Thiobacillus denitrificans ATCC 25259, complete genomehypothetical protein4e-49196
NC_015856:1733500:1759272175927217611311860Collimonas fungivorans Ter331 chromosome, complete genomeglucoamylase8e-49195
NC_003902:1220600:1243696124369612455011806Xanthomonas campestris pv. campestris str. ATCC 33913, completehypothetical protein2e-46187
NC_015138:4666544:4666544466654446684871944Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeglycoside hydrolase 15-like protein1e-44181
NC_008752:4665699:4665699466569946676721974Acidovorax avenae subsp. citrulli AAC00-1, complete genomeglycoside hydrolase 15-related protein1e-43178
NC_016147:3023180:3023180302318030249611782Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeglycosyl hydrolase1e-40168
NC_013722:751473:7528347528347546151782Xanthomonas albilineans, complete genomeputative glycosyl hydrolase protein2e-40167
NC_014817:142976:1608891608891627481860Asticcacaulis excentricus CB 48 chromosome 2, complete sequenceglycoside hydrolase 15-related protein2e-40167
NC_014625:1903277:1923201192320119249881788Ketogulonicigenium vulgare Y25 chromosome, complete genomeglycoside hydrolase 15-like protein2e-36154
NC_013235:4045589:4047598404759840493791782Nakamurella multipartita DSM 44233, complete genomeglycoside hydrolase 15-related4e-31136
NC_013235:402819:4154764154764173111836Nakamurella multipartita DSM 44233, complete genomeglycoside hydrolase 15-related9e-31135
NC_007644:626992:6824356824356842431809Moorella thermoacetica ATCC 39073, complete genomeGlycoside hydrolase 15-related1e-27125
NC_013037:2851940:2852634285263428538781245Dyadobacter fermentans DSM 18053, complete genome2e-21104
NC_013037:2851940:285405928540592854343285Dyadobacter fermentans DSM 18053, complete genome2e-0861.2
NC_011894:983572:101365810136581014500843Methylobacterium nodulans ORS 2060, complete genome7e-0652.8