Pre_GI: BLASTP Hits

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Query: NC_007333:2093167:2116249 Thermobifida fusca YX, complete genome

Start: 2116249, End: 2117091, Length: 843

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003155:7979050:798310179831017983961861Streptomyces avermitilis MA-4680, complete genomehypothetical protein1e-74279
NC_013929:8106492:811546681154668116389924Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein6e-74277
NC_018750:1390029:139844913984491399396948Streptomyces venezuelae ATCC 10712, complete genomeRecB family exonuclease7e-73273
NC_003888:1751179:176828517682851769139855Streptomyces coelicolor A3(2), complete genomehypothetical protein8e-73273
NC_010612:3745332:374624837462483747129882Mycobacterium marinum M, complete genomehypothetical protein4e-63241
NC_008611:2615204:261923126192312620112882Mycobacterium ulcerans Agy99, complete genomehypothetical protein1e-62239
NC_016782:1227246:122866712286671229572906Corynebacterium diphtheriae 241 chromosome, complete genomehypothetical protein4e-59228
NC_016786:1218032:122863612286361229541906Corynebacterium diphtheriae HC01 chromosome, complete genomehypothetical protein4e-59228
NC_016799:1268706:128398812839881284854867Corynebacterium diphtheriae 31A chromosome, complete genomehypothetical protein3e-59228
NC_016790:1177349:119546911954691196374906Corynebacterium diphtheriae VA01 chromosome, complete genomehypothetical protein7e-59227
NC_016787:1207488:121809212180921218997906Corynebacterium diphtheriae HC03 chromosome, complete genomehypothetical protein7e-59227
NC_016788:1214026:122811812281181228984867Corynebacterium diphtheriae HC04 chromosome, complete genomehypothetical protein8e-59227
NC_016785:1193471:120875312087531209619867Corynebacterium diphtheriae CDCE 8392 chromosome, complete genomehypothetical protein8e-59227
NC_016783:1239293:125457512545751255441867Corynebacterium diphtheriae INCA 402 chromosome, complete genomehypothetical protein8e-59227
NC_002935:1237585:125494212549421255808867Corynebacterium diphtheriae NCTC 13129, complete genomehypothetical protein8e-59227
NC_013174:1254874:127574812757481276644897Jonesia denitrificans DSM 20603, complete genomeRecB family exonuclease-like protein2e-58226
NC_016800:1243000:125706512570651257970906Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein2e-58225
NC_016789:1257392:127263412726341273539906Corynebacterium diphtheriae PW8 chromosome, complete genomehypothetical protein2e-58225
NC_016802:1212726:122796912279691228874906Corynebacterium diphtheriae HC02 chromosome, complete genomehypothetical protein2e-58225
NC_016801:1255611:127372812737281274633906Corynebacterium diphtheriae C7 (beta) chromosome, complete genomehypothetical protein3e-58225
NC_015859:1631573:163293716329371633773837Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein6e-57221
NC_020133:2886541:290752829075282908253726Mycobacterium liflandii 128FXT, complete genomeExonuclease RecB family8e-47187
NC_014507:2319842:2335593233559323386073015Methanoplanus petrolearius DSM 11571 chromosome, complete genomeUvrD/REP helicase2e-1996.3
NC_011832:619874:6202246202246232833060Candidatus Methanosphaerula palustris E1-9c, complete genomeUvrD/REP helicase2e-1479.7
NC_018876:168207:1682071682071712693063Methanolobus psychrophilus R15 chromosome, complete genomeUvrD/REP helicase1e-1377.4
NC_014623:3199248:3217631321763132188061176Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein4e-1065.5
NC_014623:3097675:3115205311520531163801176Stigmatella aurantiaca DW4/3-1 chromosome, complete genomehypothetical protein7e-1064.7
NC_015711:8964410:8964410896441089655851176Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein7e-1064.7
NC_009925:6253059:626048262604826261270789Acaryochloris marina MBIC11017, complete genomehypothetical protein7e-0961.2
NC_011884:2551715:255462425546242555415792Cyanothece sp. PCC 7425, complete genomehypothetical protein6e-0755.1