Pre_GI: BLASTP Hits

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Query: NC_007333:2093167:2105494 Thermobifida fusca YX, complete genome

Start: 2105494, End: 2106444, Length: 951

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017186:7480714:748847774884777489448972Amycolatopsis mediterranei S699 chromosome, complete genomeRimK-like protein3e-60232
NC_014318:7480669:748843274884327489403972Amycolatopsis mediterranei U32 chromosome, complete genomeRimK-like protein3e-60232
NC_018524:301992:316366316366317325960Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeATP-grasp ribosomal peptide maturase, SAV_5884 family protein4e-60231
NC_016109:1775259:178451417845141785476963Kitasatospora setae KM-6054, complete genomehypothetical protein7e-46184
NC_003888:3111998:312563431256343126614981Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-41169
NC_014664:3003633:300410130041013005072972Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeRimK domain protein ATP-grasp9e-38157
NC_016109:785819:801821801821802564744Kitasatospora setae KM-6054, complete genomehypothetical protein8e-33140
NC_015422:2806832:282096028209602821943984Alicycliphilus denitrificans K601 chromosome, complete genomeRimK domain-containing protein ATP-grasp5e-31135
NC_002947:4167500:422688042268804227839960Pseudomonas putida KT2440, complete genomehypothetical protein2e-29130
NC_020829:2754203:277732127773212778274954Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein5e-29128
NC_015737:2691246:272831127283112729282972Clostridium sp. SY8519, complete genomehypothetical protein2e-28126
NC_007005:3199820:322242432224243223383960Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-28125
NC_018080:6048516:606163460616346062593960Pseudomonas aeruginosa DK2 chromosome, complete genomehypothetical protein2e-27123
NC_009792:3665369:367905536790553680008954Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-24112
NC_011601:2139188:216633921663392167244906Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomehypothetical protein2e-23109
NC_017267:29461:3632036320374021083Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completehypothetical protein1e-21104
NC_006177:280234:315658315658316614957Symbiobacterium thermophilum IAM 14863, complete genomehypothetical protein1e-1997.4
NC_010571:2423732:244323224432322444194963Opitutus terrae PB90-1, complete genomehypothetical protein2e-1996.7
NC_003919:4946884:495315349531534953989837Xanthomonas axonopodis pv. citri str. 306, complete genomehypothetical protein8e-1994.7
NC_013526:316075:328948328948329907960Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genome1e-1687.8
NC_007705:1828375:1836657183665718377751119Xanthomonas oryzae pv. oryzae MAFF 311018, complete genomehypothetical protein3e-1479.3
NC_006834:1849492:1857506185750618586241119Xanthomonas oryzae pv. oryzae KACC10331, complete genomehypothetical protein3e-1479.3
NC_013722:3022236:3033763303376330348331071Xanthomonas albilineans, complete genomehypothetical protein2e-1376.6