Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1843065 Thermobifida fusca YX, complete genome

Start: 1843065, End: 1844732, Length: 1668

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013510:3117837:3131141313114131328261686Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein, Cse1 family0690
NC_014210:1588426:1588426158842615901471722Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,CRISPR-associated protein, Cse1 family0652
NC_013131:4422000:4432703443270344373254623Catenulispora acidiphila DSM 44928, complete genomeCRISPR-associated protein, Cse1 family5e-152538
NC_019673:1988853:2040551204055120422031653Saccharothrix espanaensis DSM 44229 complete genomeCRISPR-associated Cse1 family protein4e-111402
NC_006361:4574536:4589051458905145907091659Nocardia farcinica IFM 10152, complete genomehypothetical protein1e-104380
NC_007164:775000:7816397816397833241686Corynebacterium jeikeium K411, complete genomehypothetical protein2e-64247
NC_012590:977920:9865899865899883341746Corynebacterium aurimucosum ATCC 700975, complete genomeCRISPR-associated protein6e-63242
NC_015389:481282:4896294896294913531725Coriobacterium glomerans PW2 chromosome, complete genomeCRISPR-associated protein, Cse1 family3e-59229
NC_018720:1812000:1819002181900218207591758Bifidobacterium asteroides PRL2011 chromosome, complete genomeCRISPR-associated protein, Cse1 family3e-52206
NC_008278:514600:5227265227265241981473Frankia alni ACN14a, complete genomehypothetical protein; putative IMP dehydrogenase/GMP reductase domains2e-41171
NC_016109:603829:6185766185766202881713Kitasatospora setae KM-6054, complete genomeputative CRISPR-associated protein7e-41169
NC_014318:6395392:6447993644799364495731581Amycolatopsis mediterranei U32 chromosome, complete genomeCRISPR-associated protein CSE13e-33144
NC_017186:6395435:6448037644803764496171581Amycolatopsis mediterranei S699 chromosome, complete genomeCRISPR-associated protein CSE13e-33144
NC_015387:942974:9539549539549554561503Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Cse1 family2e-26120
NC_015737:2146953:2154718215471821564721755Clostridium sp. SY8519, complete genomehypothetical protein5e-24113
NC_007775:723925:7380367380367396101575Synechococcus sp. JA-3-3Ab, complete genomeCRISPR-associated protein, Cse1 family2e-23111
NC_008526:343445:3502683502683519771710Lactobacillus casei ATCC 334, complete genomeCRISPR-associated protein3e-23110
NC_013890:1175931:1183008118300811846391632Dehalococcoides sp. GT chromosome, complete genomeCRISPR-associated protein, Cse1 family2e-1791.3
NC_007356:1165760:1207158120715812087891632Dehalococcoides sp. CBDB1, complete genomehypothetical protein2e-1791.3
NC_010610:795975:8092088092088107851578Lactobacillus fermentum IFO 3956, complete genomehypothetical protein2e-1791.3
NC_008529:735233:7496007496007513241725Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completeCRISPR-associated protein2e-1584.3
NC_008609:2518993:2530397253039725319171521Pelobacter propionicus DSM 2379, complete genomeCRISPR-associated protein, Cse1 family3e-1584
NC_014727:798191:8127548127548144781725Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,crispr-associated protein3e-1584
NC_008054:745704:7574567574567591801725Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, completehypothetical protein3e-1377.4
NC_015170:54000:6009760097616681572Deinococcus proteolyticus MRP plasmid pDEIPR03, complete sequenceCRISPR-associated protein, Cse1 family3e-1067.4