Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1819567 Thermobifida fusca YX, complete genome

Start: 1819567, End: 1821351, Length: 1785

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009972:791702:8041338041338059831851Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genomeCRISPR-associated RAMP Crm2 family protein2e-1481.3
NC_007333:39579:588935889359519627Thermobifida fusca YX, complete genomehypothetical protein1e-1378.6
NC_013894:1:5498549873571860Thermocrinis albus DSM 14484 chromosome, complete genomeCRISPR-associated protein, Crm2 family2e-1274.7
NC_011961:85083:1108851108851126991815Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecrispr-associated protein, Crm2 family7e-1169.3
NC_015387:1898496:1914656191465619164251770Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein, Crm2 family1e-0758.9
NC_014221:1786122:1795984179598417974111428Truepera radiovictrix DSM 17093 chromosome, complete genomeCRISPR-associated protein, Crm2 family2e-0757.8
NC_008095:8890464:8892622889262288944121791Myxococcus xanthus DK 1622, complete genomeCRISPR-associated protein Crm29e-0755.8