Pre_GI: BLASTP Hits

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Query: NC_007333:1743890:1773947 Thermobifida fusca YX, complete genome

Start: 1773947, End: 1774435, Length: 489

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016111:3659269:366934736693473669823477Streptomyces cattleya NRRL 8057, complete genomeNUDIX hydrolase5e-23107
NC_016582:7101701:711463371146337115118486Streptomyces bingchenggensis BCW-1 chromosome, complete genomeNUDIX hydrolase8e-23106
NC_013131:9903320:992140199214019921871471Catenulispora acidiphila DSM 44928, complete genomeNUDIX hydrolase5e-22103
NC_016109:3591401:364137336413733641846474Kitasatospora setae KM-6054, complete genomehypothetical protein6e-2199.8
NC_016111:3486000:349228834922883492800513Streptomyces cattleya NRRL 8057, complete genomeNUDIX hydrolase8e-2095.9
NC_014215:1190447:119219311921931192978786Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,NUDIX hydrolase3e-1994.4
NC_019673:3726519:373667337366733737197525Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein6e-1889.7
NC_015953:3227000:323884332388433239325483Streptomyces sp. SirexAA-E chromosome, complete genomeNUDIX hydrolase3e-1684.3
NC_014643:2354507:237547223754722375957486Rothia dentocariosa ATCC 17931 chromosome, complete genomeNUDIX hydrolase2e-1581.6
NC_019673:7400817:740561274056127406073462Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein2e-1478.6
NC_016109:1775259:179061117906111791120510Kitasatospora setae KM-6054, complete genomehypothetical protein2e-1478.2
NC_017186:9604427:961749596174959617983489Amycolatopsis mediterranei S699 chromosome, complete genomeNUDIX hydrolase5e-1477
NC_014318:9604367:961743596174359617923489Amycolatopsis mediterranei U32 chromosome, complete genomeNUDIX hydrolase5e-1477
NC_013093:1213908:122711812271181227627510Actinosynnema mirum DSM 43827, complete genomeNUDIX hydrolase3e-1373.9
NC_003888:5790104:580942258094225809892471Streptomyces coelicolor A3(2), complete genomemutT-like protein4e-0960.5
NC_009921:6421387:642320864232086423678471Frankia sp. EAN1pec, complete genomeNUDIX hydrolase1e-0859.3
NC_014815:2639339:264732926473292647841513Micromonospora sp. L5 chromosome, complete genomenudix hydrolase1e-0858.5
NC_013406:2866000:289987428998742900299426Paenibacillus sp. Y412MC10 chromosome, complete genomeNUDIX hydrolase2e-0858.5
NC_014391:6640327:664343266434326643944513Micromonospora aurantiaca ATCC 27029 chromosome, complete genomeNUDIX hydrolase2e-0858.5
NC_010612:3813481:381430538143053814772468Mycobacterium marinum M, complete genomehypothetical protein1e-0755.8
NC_016947:2380500:243760724376072438074468Mycobacterium intracellulare MOTT-02 chromosome, complete genomeNUDIX hydrolase1e-0755.5
NC_008146:3349415:336220633622063362673468Mycobacterium sp. MCS, complete genomeNUDIX hydrolase1e-0755.5
NC_009077:3323291:333608233360823336549468Mycobacterium sp. JLS, complete genomeNUDIX hydrolase1e-0755.5
NC_008705:3377697:339048833904883390955468Mycobacterium sp. KMS, complete genomeNUDIX hydrolase1e-0755.5
NC_013510:5499447:550561555056155506091477Thermomonospora curvata DSM 43183, complete genomeNUDIX hydrolase1e-0755.5
NC_011894:6731115:673816467381646738631468Methylobacterium nodulans ORS 2060, complete genomeNUDIX hydrolase1e-0755.5
NC_008595:3914463:392772739277273928194468Mycobacterium avium 104, complete genomenudix hydrolase1e-0755.5
NC_007168:2448422:245294424529442453363420Staphylococcus haemolyticus JCSC1435, complete genomehypothetical protein2e-0755.1
NC_007777:135222:161702161702162172471Frankia sp. CcI3, complete genomeNUDIX hydrolase2e-0755.1
NC_008062:81338:872898728987750462Burkholderia cenocepacia AU 1054 chromosome 3, complete sequenceNUDIX hydrolase4e-0753.9
NC_008544:55451:651086510865539432Burkholderia cenocepacia HI2424 chromosome 3, complete sequenceNUDIX hydrolase6e-0753.5
NC_015957:115133:124416124416124883468Streptomyces violaceusniger Tu 4113 chromosome, complete genomeNUDIX hydrolase1e-0652.4
NC_019673:1420198:142711114271111427626516Saccharothrix espanaensis DSM 44229 complete genomeNUDIX family hydrolase2e-0652
NC_013406:5066769:509806350980635098470408Paenibacillus sp. Y412MC10 chromosome, complete genomeNUDIX hydrolase2e-0651.6
NC_016109:4753493:475762947576294758099471Kitasatospora setae KM-6054, complete genomeputative hydrolase3e-0651.2
NC_012797:1:258442584426323480Desulfovibrio magneticus RS-1 plasmid pDMC1, complete sequencehypothetical protein3e-0651.2
NC_015957:10505870:105241971052419710524667471Streptomyces violaceusniger Tu 4113 chromosome, complete genomeNUDIX hydrolase3e-0650.8
NC_013595:9547254:956309795630979563573477Streptosporangium roseum DSM 43021, complete genomeADP-ribose pyrophosphatase-like protein4e-0650.8
NC_014221:687537:708463708463708936474Truepera radiovictrix DSM 17093 chromosome, complete genomeNUDIX hydrolase6e-0650.1