Pre_GI: BLASTP Hits

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Query: NC_007333:1129826:1155995 Thermobifida fusca YX, complete genome

Start: 1155995, End: 1159117, Length: 3123

Host Lineage: Thermobifida fusca; Thermobifida; Nocardiopsaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Produces thermostable enzymes. Members of this genus are distinguished from most actinomycetes by their ability to form clustered spores that attach directly to the substrate mycelia, and not to the aerial mycelia. Moreover, these bacteria do not produce aerial mycelia at all. M. fusca is the most thermophilic, with some growth detectable at up to 75 degrees C. The natural habitat of Thermobifida is self-heated organic materials, like rotting hay, compost, manure or urban waste piles, etc., which they share with other thermophilic and thermotolerant actinomycetes. Biological and physiological features of these bacteria are accordingly adapted to the conditions of such environments, namely the high temperatures and the presence of abundant plant materials and other bio-polymer substrates of natural origin. Actinomycetes are well suited for this environment because they generally grow as branching hyphae and are well adapted to penetration and degradation of insoluble substrates such as lignocellulose. Spores of Thermobifida are known to cause allergic respiratory diseases called mushroom worker disease and farmer's lung, which develop in agricultural workers who by the nature of their work happen to breathe in significant amounts of actinomycete spores from hay, compost, etc. Some isolates of this organism are able to mineralize plastic disposals and other anthropogenic xenobiotics. Thermobifidaare of particular interest because they produce multiple thermostable enzymes involved in the degradation of lignocellulose.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018750:2118907:2118907211890721218942988Streptomyces venezuelae ATCC 10712, complete genomeGlutamate-ammonia-ligase adenylyltransferase0810
NC_013521:1713416:1710324171032417134343111Sanguibacter keddieii DSM 10542, complete genomeglutamine synthetase adenylyltransferase0744
NC_008711:1892881:1892881189288118958923012Arthrobacter aurescens TC1, complete genomeputative Glutamate-ammonia-ligase adenylyltransferase0722
NC_014550:2314359:2331053233105323340793027Arthrobacter arilaitensis Re117, complete genome[Glutamate--ammonia ligase] adenylyltransferase8e-179628
NC_014616:1065500:1085531108553110886293099Bifidobacterium bifidum S17 chromosome, complete genomeglutamate-ammonia-ligase adenylyltransferase1e-165584
NC_014168:2820315:2843720284372028468123093Segniliparus rotundus DSM 44985 chromosome, complete genome(Glutamate--ammonia-ligase) adenylyltransferase1e-158561
NC_014246:1787154:1789402178940217926023201Mobiluncus curtisii ATCC 43063 chromosome, complete genome[glutamate--ammonia-ligase] adenylyltransferase2e-111404
NC_014158:1566310:1566310156631015693393030Tsukamurella paurometabola DSM 20162 chromosome, complete genome(Glutamate--ammonia-ligase) adenylyltransferase2e-109398
NC_008595:2252830:2252830225283022558262997Mycobacterium avium 104, complete genomeglutamate-ammonia-ligase adenylyltransferase4e-103376
NC_007484:130896:1461741461741490832910Nitrosococcus oceani ATCC 19707, complete genomeGlutamate-ammonia-ligase adenylyltransferase3e-54214
NC_014315:114151:1309251309251338222898Nitrosococcus watsoni C-113 chromosome, complete genome(glutamate--ammonia-ligase) adenylyltransferase9e-54213
NC_014532:3479674:3497068349706835000522985Halomonas elongata DSM 2581, complete genomeglutamate-ammonia-ligase adenylyltransferase5e-47190
NC_013894:117644:1176441176441204362793Thermocrinis albus DSM 14484 chromosome, complete genome(Glutamate--ammonia-ligase) adenylyltransferase5e-37157
NC_014836:312353:3141743141743172183045Desulfurispirillum indicum S5 chromosome, complete genome(glutamate--ammonia-ligase) adenylyltransferase1e-36155
NC_011126:779500:7914277914277941172691Hydrogenobaculum sp. Y04AAS1, complete genome(Glutamate--ammonia-ligase) adenylyltransferase1e-35152
NC_015587:765500:7774587774587801482691Hydrogenobaculum sp. SHO chromosome, complete genome(Glutamate--ammonia-ligase) adenylyltransferase4e-35150
NC_015557:765500:7774037774037800932691Hydrogenobaculum sp. 3684 chromosome, complete genome(Glutamate--ammonia-ligase) adenylyltransferase4e-35150
NC_020411:765500:7786277786277801201494Hydrogenobaculum sp. HO, complete genome(Glutamate--ammonia-ligase) adenylyltransferase4e-35150
NC_011365:3221505:3221505322150532246033099Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome(glutamate--ammonia-ligase) adenylyltransferase2e-34148
NC_010125:3506955:3527382352738235306033222Gluconacetobacter diazotrophicus PAl 5, complete genomeputative glutamate-ammonia-ligase adenylyltransferase2e-34148
NC_015740:4072415:4094253409425340971982946Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeglutamate-ammonia-ligase adenylyltransferase5e-34147
NC_011901:491783:4937124937124966242913Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, complete(glutamate--ammonia-ligase) adenylyltransferase7e-32140
NC_007645:1033834:1046142104614210490332892Hahella chejuensis KCTC 2396, complete genomeGlutamine synthetase adenylyltransferase5e-31137
NC_015563:6357653:6382875638287563856192745Delftia sp. Cs1-4 chromosome, complete genomeglutamate-ammonia-ligase adenylyltransferase9e-30133
NC_000913:3176000:3194823319482331976632841Escherichia coli K12, complete genomefused deadenylyltransferase/adenylyltransferase for glutamine synthetase1e-29132
NC_010473:3273882:3292568329256832954082841Escherichia coli str. K-12 substr. DH10B, complete genomefused deadenylyltransferase; adenylyltransferase for glutamine synthetase1e-29132
NC_010468:694943:6962676962676991072841Escherichia coli ATCC 8739, complete genome(Glutamate--ammonia-ligase) adenylyltransferase1e-29132
AC_000091:3180275:3195457319545731982972841Escherichia coli W3110 DNA, complete genomefused deadenylyltransferase and adenylyltransferase for glutamine synthetase1e-29132
NC_012759:3063285:3081971308197130848112841Escherichia coli BW2952 chromosome, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase1e-29132
NC_011750:3683760:3701108370110837039482841Escherichia coli IAI39 chromosome, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase1e-29132
NC_016822:3485631:3504133350413335069732841Shigella sonnei 53G, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase3e-29131
NC_016902:693703:6937036937036965432841Escherichia coli KO11FL chromosome, complete genome(glutamate--ammonia-ligase) adenylyltransferase3e-29131
CP002516:693703:6937036937036965432841Escherichia coli KO11, complete genome(Glutamate--ammonia-ligase) adenylyltransferase3e-29131
CP002185:3393813:3409532340953234123722841Escherichia coli W, complete genomefused deadenylyltransferase/adenylyltransferase for glutamine synthetase3e-29131
NC_009801:3511444:3526485352648535293252841Escherichia coli E24377A, complete genomeglutamate-ammonia ligase adenylyltransferase6e-29130
CU928160:3263248:3278289327828932811292841Escherichia coli IAI1 chromosome, complete genomefused deadenylyltransferase ; adenylyltransferase for glutamine synthetase4e-29130
NC_011741:3263248:3278289327828932811292841Escherichia coli IAI1 chromosome, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase4e-29130
NC_008740:876115:8782268782268811262901Marinobacter aquaeolei VT8, complete genome(Glutamate--ammonia-ligase) adenylyltransferase1e-28129
NC_009800:3224575:3240190324019032430302841Escherichia coli HS, complete genomeglutamate-ammonia ligase adenylyltransferase1e-28129
CU928145:3529930:3545552354555235483922841Escherichia coli 55989 chromosome, complete genomefused deadenylyltransferase ; adenylyltransferase for glutamine synthetase9e-29129
NC_011748:3529930:3545552354555235483922841Escherichia coli 55989, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase9e-29129
NC_013361:4102894:4118613411861341214532841Escherichia coli O26:H11 str. 11368 chromosome, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase9e-29129
NC_013364:3840000:3857428385742838602682841Escherichia coli O111:H- str. 11128, complete genomefused deadenylyltransferase/adenylyltransferase for glutamine synthetase9e-29129
NC_012947:708064:7080647080647109042841Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase8e-29129
NC_012967:3113768:3129635312963531324752841Escherichia coli B str. REL606 chromosome, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase8e-29129
AP010958:3787991:3807861380786138107012841Escherichia coli O103:H2 str. 12009 DNA, complete genomefused deadenylyltransferase/adenylyltransferase for glutamine synthetase8e-29129
NC_011415:3443851:3459569345956934624092841Escherichia coli SE11 chromosome, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase8e-29129
NC_013353:3787991:3807861380786138107012841Escherichia coli O103:H2 str. 12009, complete genomefused deadenylyltransferase/adenylyltransferase for glutamine synthetase8e-29129
NC_011745:3627438:3645880364588036487202841Escherichia coli ED1a chromosome, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase2e-28128
NC_016147:513819:5138195138195166112793Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeglutamate-ammonia-ligase adenylyltransferase5e-28127
NC_010524:3914880:3931535393153539343272793Leptothrix cholodnii SP-6, complete genome(Glutamate--ammonia-ligase) adenylyltransferase3e-27124
NC_016612:627118:6412456412456440792835Klebsiella oxytoca KCTC 1686 chromosome, complete genomebifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase6e-26120
NC_014752:197000:1975101975102002002691Neisseria lactamica ST-640, complete genomeglutamate-ammonia-ligase adenylyltransferase1e-25119
NC_020411:765500:7774317774317785761146Hydrogenobaculum sp. HO, complete genome(Glutamate--ammonia-ligase) adenylyltransferase1e-1689.7