Pre_GI: BLASTP Hits

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Query: NC_006905:946418:954866 Salmonella enterica subsp. enterica serovar Choleraesuis str

Start: 954866, End: 955078, Length: 213

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain was isolated from a 58-year old man with sepsis and has been shown to be resistant to ciprofloxacin and ceftriaxone. This organism also causes severe disease (swine paratyphoid) in pigs. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010102:2178594:218959821895982189861264Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1994
NC_011080:924326:932781932781932978198Salmonella enterica subsp. enterica serovar Newport str. SL254,3e-1993.6
NC_011083:967260:975715975715975912198Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,3e-1993.6
NC_011205:944125:952585952585952782198Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533e-1993.6
NC_012125:894955:903409903409903606198Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein3e-1993.6
NC_016860:959609:968063968063968260198Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-1993.6
NC_016863:920346:928800928800928997198Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein3e-1993.6
NC_016831:2108557:211955821195582119821264Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-1993.6
NC_011094:973140:981590981590981853264Salmonella enterica subsp. enterica serovar Schwarzengrund strMaoC like domain-containing protein6e-1889.4
NC_010067:2488141:250106625010662501911846Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-1685.1